Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Apr8g2104 | ATGGCGTCGTCGAAGCTGATGGCTTCTTCGAACTCAAGAAAATCGGAGACACCCTCTTCTCCTCCTCCAAACCCCCAATTCACCACCACCAACTTCATGCCCATGCCCGACGCCACCGCCACTCCCAAAACAGTCGACGAAGTGTGGCGGGAGATCGTCGCCGGCGAGCGCCGCGAGTGCAAGGAGGAGGCTCCAGACGAGATGATGACACTGGAGGACTTCCTCGTCAAGGCCCGCGCCGTCGACGACGAGGACGAGGACGAGGTCAAGATGCCAATGCCACTCACCGAGAGGCTGAGCGGCGGCGGCGGGGTCTTCGCGTTCGACCCTATTCCGACGACGCCGTTTCAGGGATTAGAGAGCGTGGAAGGGTCGGTGATAGGGTTTGGGAATGGCGTGGAGGTGGTGGAAGGGGGAAGGGGGAAGAGGGGTCGTCCCGTTTTGGAACAGTTGGATAAGGCTGCGCAACAGAGACAGAGGAGAATGATCAAGAACAGAGAATCTGCAGCTAGGTCTAGGGAACGCAAGCAGGCTTATCAAGTAGAATTGGAGTCCTTGGCGGTGAAACTAGAGGAAGAAAATGACAAACTATTGAAGGAAAAGGCTGAGAGAAAAAAGGAGAGGTACAAACAGCTAATGGAAAAAGTGATTCCTATTGGTGAGAAGCGAAGGCCACCACGATTACTCCGTAGAGTTCGCTCCTGTCAATGGTAG | 714 | 0.5532 | MASSKLMASSNSRKSETPSSPPPNPQFTTTNFMPMPDATATPKTVDEVWREIVAGERRECKEEAPDEMMTLEDFLVKARAVDDEDEDEVKMPMPLTERLSGGGGVFAFDPIPTTPFQGLESVEGSVIGFGNGVEVVEGGRGKRGRPVLEQLDKAAQQRQRRMIKNRESAARSRERKQAYQVELESLAVKLEEENDKLLKEKAERKKERYKQLMEKVIPIGEKRRPPRLLRRVRSCQW* | 238 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Apr8g2104 | 237 | PANTHER | CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED | 38 | 236 | IPR043452 | GO:0003700|GO:0045893 | |
| Apr8g2104 | 237 | CDD | bZIP_plant_BZIP46 | 157 | 203 | - | - | |
| Apr8g2104 | 237 | Gene3D | - | 155 | 206 | - | - | |
| Apr8g2104 | 237 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 160 | 175 | IPR004827 | GO:0003700|GO:0006355 | |
| Apr8g2104 | 237 | SMART | brlzneu | 153 | 217 | IPR004827 | GO:0003700|GO:0006355 | |
| Apr8g2104 | 237 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 155 | 207 | IPR004827 | GO:0003700|GO:0006355 | |
| Apr8g2104 | 237 | SUPERFAMILY | Leucine zipper domain | 157 | 208 | IPR046347 | GO:0003700|GO:0006355 | |
| Apr8g2104 | 237 | PANTHER | BASIC LEUCINE ZIPPER TRANSCRIPTION FACTOR | 38 | 236 | - | - | |
| Apr8g2104 | 237 | MobiDBLite | consensus disorder prediction | 1 | 17 | - | - | |
| Apr8g2104 | 237 | Coils | Coil | 176 | 215 | - | - | |
| Apr8g2104 | 237 | MobiDBLite | consensus disorder prediction | 1 | 44 | - | - | |
| Apr8g2104 | 237 | Pfam | bZIP transcription factor | 155 | 214 | IPR004827 | GO:0003700|GO:0006355 |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Apr8g2104 | 43 | 237 | bZIP Transcription Factor Family | AT5G44080 | 57.073 | 9.34e-70 | 214 |
Transcription factors information
| Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
|---|---|---|---|---|---|---|---|
| TF | bZIP | Apr8g2104 | bZIP_1 | 1e-12 | CL0018 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Apr8g2104 | K14432 | - | gmx:102659969 | 281.952 |