Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Apr8g2097 | ATGTGCTTGCTAACGGTGGCGCACCAAGGAGGTTCGGGTTCCGGTTCAGGTTCGGGCAAGTTCGTGAGGTTCACGAGCGGCGATGAGGAAGTGGAAGACCCTTTTGGACAAGAAGGTGGAAGCTCAGGTCCATCAATGGGAGGGACAGGGAGTATGGTTTCGGTTCCGAGCCAAGTGGTGTCAGGCTCAGGCTCAGGCTCAGGCTCAGGCTCAGGGCAGATTAACACCGAGTGGGTCCCCGGAAGTGGTTATCCTATGATGTCAGGTTTTATGCATGTCTCTTCTCCTCGTTTGTCTTCTTCTTCTTCTTCTGCCCCTCTTTTGGGGGTTGGACACAAAAGAGCGCGTGAAGATCACACTGTTTCTTCTCAGCAATTAATTCCACTCTATGGAACCGCCACTCCTCACTTCTCACTACCTTCATCATCAGTGACAGAAGAAGCTACAACTGTTGCCACTACAACGCAAGGGAGTGAAACGGCGTCGTATGAAGAGAGCGGTGAGAGGAGGAGGAGATACAGAGGGGTGAGGCAGAGACCGTGGGGGAAATGGGCCGCGGAAATTCGCGATCCTCACAAAGCAGCGAGAGTGTGGCTTGGAACGTTCGACACTGCAGAAGCTGCAGCAAGAGCTTACGATGAAGCTGCATTGAGGTTCAGAGGTAACAGAGCCAAACTCAACTTCCCTGAAAACGTTGCTGCAGTTCGACCCGATTTTCCGCCCAGTACGATCGCCGTTTCTGCTTCCCCGGCGACCCATTTTTCGCCGGCGGTGATGCAGGGCTCGCAGTTTCAGGGATCATCCGATTTTATGAGAGATTACTGGGAATACTCTCAGCTTCTGAGAGGCACAGGGGACTTCCATGGACTCGAGCAGTGGTTCTATGATTCGCAAATGGCGCAGATTCAGTCTTCCTCTTCGTTGTTATCGCCGTCGCTCTTTTTGTCGTCGTCTTCGTCCCAAACTGCATTTTCACCCTCCTCTGCTTCGTTTCCTCTGTTTTCTAGTCAGCAAATGGGGTTTTTCCGGCCGCCGGGAGACTCCTCTCACGGCGGTGGAGACGGTAGTGGCGGGTCGGAGTTTCCACCTTCGACGTGGTCAGATACCAGTGGCTATCCTCCTCCCCCTGGTTGA | 1134 | 0.5362 | MCLLTVAHQGGSGSGSGSGKFVRFTSGDEEVEDPFGQEGGSSGPSMGGTGSMVSVPSQVVSGSGSGSGSGSGQINTEWVPGSGYPMMSGFMHVSSPRLSSSSSSAPLLGVGHKRAREDHTVSSQQLIPLYGTATPHFSLPSSSVTEEATTVATTTQGSETASYEESGERRRRYRGVRQRPWGKWAAEIRDPHKAARVWLGTFDTAEAAARAYDEAALRFRGNRAKLNFPENVAAVRPDFPPSTIAVSASPATHFSPAVMQGSQFQGSSDFMRDYWEYSQLLRGTGDFHGLEQWFYDSQMAQIQSSSSLLSPSLFLSSSSSQTAFSPSSASFPLFSSQQMGFFRPPGDSSHGGGDGSGGSEFPPSTWSDTSGYPPPPG* | 378 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Apr8g2097 | 377 | MobiDBLite | consensus disorder prediction | 30 | 77 | - | - | |
Apr8g2097 | 377 | PANTHER | DNA-BINDING DOMAIN | 48 | 349 | IPR044808 | GO:0003700|GO:0009873 | |
Apr8g2097 | 377 | SUPERFAMILY | DNA-binding domain | 172 | 230 | IPR016177 | GO:0003677 | |
Apr8g2097 | 377 | SMART | rav1_2 | 172 | 235 | IPR001471 | GO:0003700|GO:0006355 | |
Apr8g2097 | 377 | MobiDBLite | consensus disorder prediction | 140 | 171 | - | - | |
Apr8g2097 | 377 | MobiDBLite | consensus disorder prediction | 337 | 377 | - | - | |
Apr8g2097 | 377 | MobiDBLite | consensus disorder prediction | 42 | 77 | - | - | |
Apr8g2097 | 377 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF110 | 48 | 349 | - | - | |
Apr8g2097 | 377 | Gene3D | AP2/ERF domain | 171 | 231 | IPR036955 | GO:0003700|GO:0006355 | |
Apr8g2097 | 377 | MobiDBLite | consensus disorder prediction | 140 | 162 | - | - | |
Apr8g2097 | 377 | Pfam | AP2 domain | 172 | 221 | IPR001471 | GO:0003700|GO:0006355 | |
Apr8g2097 | 377 | CDD | AP2 | 180 | 231 | IPR001471 | GO:0003700|GO:0006355 | |
Apr8g2097 | 377 | ProSiteProfiles | AP2/ERF domain profile. | 172 | 229 | IPR001471 | GO:0003700|GO:0006355 | |
Apr8g2097 | 377 | PRINTS | Ethylene responsive element binding protein signature | 173 | 184 | IPR001471 | GO:0003700|GO:0006355 | |
Apr8g2097 | 377 | PRINTS | Ethylene responsive element binding protein signature | 195 | 211 | IPR001471 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Apr8g2097 | Apr-Chr8 | 31506385 | 31508717 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Apr8g2097 | 156 | 232 | AP2-EREBP Transcription Factor Family | AT2G33710 | 72.727 | 8.05e-34 | 124 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-ERF | Apr8g2097 | AP2 | 7.1e-15 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Apr8g2097 | - | - | aprc:113873061 | 563.918 |