Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2093 ATGGAACGCGCTTACGAAGCCATCCTAGCCGCCACCGCCAGCTTCTTCATCGTCACCCTCCTCCTCGCCGCCATCATCATCCTCTGCCACCACCGCAACTCCTCCAAAATCCCAACCCCAACCACTCGCATCCGAACCCGACCCGCTTCACACCACAACGCCTCCCTCTCCGTCGACGCCAGCTGGTCCTCCGACCCCAACCTCATCAAGATCTCGTGGGAGGAACTCGCACGCGCCACCGACAACTTCTCCCCTAACCTGATCGTCGGCGACGGCAGCTTCGGCCTCGTCTACAAGGCGCGTCTCTCCACGGGCGCAATCGTGGCAGTCAAAAAACTGTCCCCCGACGCCTTCCAAGGCTTCCGTGAATTCACGGCGGAGATGGAAACCCTAAGCAAACTCTGCCACCGCAACATCGTGAGAATCCTCGGTTATTGGGCCTCTGGGCCCGAACGCTTACTCGTCTACGAGTTCATCCAAAAAGGAAACCTCGATCAATGGCTCCACGAACCCTCCTCAAACGACGACGCCTCGCACGACCCCCTTCGCTTCCCCCTCTCTTGGCAAACCCGGGTCAACATTATTCGTGGCGTTGCACATGGGCTTTGCTATTTACATAGCCTCGAGAAGCCCATTATTCACCGCGACATTAAGGCTAGCAATGTCTTGTTGGACTCCGAGTTCGAAGCCCATATTGCTGACTTTGGGCTTGCGCGCAGGATCGATAACTCCCATTCCCACGTGTCAACGCAATTCGCGGGTACCATTGGGTACATGCCCCCGGAGTACAGGGATGGGGTTATGGTGAATGTTGTGAATAAGAAGGTGGATGTGTATAGTTTTGGGGTGTTGATGATTGAAACTGCATCGGGCCACAGGCCCAATTTGCCCATGAAGTTGGACCAGAATGACATTGGGATGGTCCAGTGGGCCCGCAAGATGAAGGAGCAAAATGAGGAGATGAAGATGCTTGATGCGAGTATCTCCAGAGAAGGGTTGAGGGAGGATAGTGTTAAGGAGTATGTCCGTATTGCTTGTGAGTGCACCGGTGAGTTACAGAAGGAAAGGCCCGAAATGCCCCAAGTTGTCCATTGGTTGGACTCAATCCCCCTTTGA 1116 0.5502 MERAYEAILAATASFFIVTLLLAAIIILCHHRNSSKIPTPTTRIRTRPASHHNASLSVDASWSSDPNLIKISWEELARATDNFSPNLIVGDGSFGLVYKARLSTGAIVAVKKLSPDAFQGFREFTAEMETLSKLCHRNIVRILGYWASGPERLLVYEFIQKGNLDQWLHEPSSNDDASHDPLRFPLSWQTRVNIIRGVAHGLCYLHSLEKPIIHRDIKASNVLLDSEFEAHIADFGLARRIDNSHSHVSTQFAGTIGYMPPEYRDGVMVNVVNKKVDVYSFGVLMIETASGHRPNLPMKLDQNDIGMVQWARKMKEQNEEMKMLDASISREGLREDSVKEYVRIACECTGELQKERPEMPQVVHWLDSIPL* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2093 371 ProSitePatterns Protein kinases ATP-binding region signature. 89 112 IPR017441 GO:0005524
Apr8g2093 371 ProSiteProfiles Protein kinase domain profile. 83 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2093 371 Gene3D Phosphorylase Kinase; domain 1 44 158 - -
Apr8g2093 371 Pfam Protein kinase domain 88 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2093 371 PANTHER RECEPTOR SERINE-THREONINE PROTEIN KINASE 1 368 - -
Apr8g2093 371 PANTHER OS01G0253100 PROTEIN 1 368 IPR045271 GO:0004714|GO:0006468
Apr8g2093 371 ProSitePatterns Serine/Threonine protein kinases active-site signature. 212 224 IPR008271 GO:0004672|GO:0006468
Apr8g2093 371 SMART serkin_6 83 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2093 371 SUPERFAMILY Protein kinase-like (PK-like) 61 366 IPR011009 -
Apr8g2093 371 Gene3D Transferase(Phosphotransferase) domain 1 159 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2093 Apr-Chr8 31476100 31477963 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2093 49 369 Receptor kinase-like Gene Family AT5G07280 41.615 1.35e-67 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Apr8g2093 Pkinase 1.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2093 - - gmx:100802728 557.755