Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2091 ATGGGTTGTGTTCAGGCTAAGTCACTGGATTTGGAAGCTTCAGATTATAGAAGCCTAGAGAGGTTGAAATTGGATAATGGGTATGTTGCAAGTTCTGACTTTGTTGCTCACAGAAGATCCACTGGAGGTGTTGCCAATGGTGAAAGGCAAGGCCTTGCTGTTGGTGTGGGTCATAAGGACAAGTTGGTTGGCAGAGAGAGGAGTAAGAAGTTGTCAAATAAGTGTTTTGTGGATGACATGGTTGGTGGGTGGCCCAGGTGGTTTGTTGATAATGTTCCTGAACAGGTTTTGGCTACTCTGGTTCCTAAGAGTGCTGAATCGTACAAAATGATTGATAAGGTAGGGCAAGGAACCTACAGCAATGTCTATAAAGCTCTGGATCGAGACACGGGAGAAATTGTGGCCCTGAAGAAGGTCCGCTTCAATACATCAGAACCTGAAAGCATAAAATTTATGGCAAGAGAAATTATGATATTGCAGAGACTGGATCATCCCAATGTAGTAAAACTTAAAGGATTAGCTACTTCAAGAATGCAATACAGTTTATATCTAGTTTTTGACTTCATGCAAACAGATTTGGCAAGAATTATTGCTCGTCCCGAAGAAAGATTAACTGAACCACAGGTCAAGTGCTATATGCATCAATTGCTTTCAGGTCTGCAGCATTGCCATGATAGGGGAATTCTGCATCGGGATATAAAGGGGTCAAACCTTTTGATTGATAAAAATGGGATGCTTAAGATTGCAGATTTTGGGCTTGCCAATTTTTATGCTCCAGACCGTCACCAGCCTCTCACAAGTCGGGTTGTGACACTATGGTACAGAGCTCCCGAGTTGTTGTTAGGTGCCACAGATTATGGAGTTGGTGTTGATCTATGGAGTGCTGGATGTCTCTTGGCAGAAATGTTTAAAGGAATTCCAATCATGCCTGGAAGAACAGAGGTTGAGCAACTTCATAAAATTTTCAGGCTATGTGGCACACCATCAGAGGAGTATTGGAGAAAGTTGAAACTTTCTACAACTTTTAGACCTCCAAAGTCTTATAGACCAAGCCTGGTAGAATCTTTCAGGGATCTACCTCCATCTTCTTTGGGTCTTTTATGCACTTTGCTTGCTTTGGATCCTGCATTTCGTGGCAGTGCATCTAAAGCTCTAAAAAATCAGTTTTTCTCTACGAGCCCATTGGCATGTGATCTCTCTGGGCTGCCTGTAACCTACAGAGAGGATGATGAGCTTGTTCAAGCGAAGGAACAGATCAAGTACATGAACTCTAAAATCAGGCGTTCTCGTACATATCTAGAGCGTCAGAAGAATTTAGCATCTAAGAGGCCAATAGAACACACTGCATCTTCTAAAGAGGAATTGATAAGGAATGTTAAACCTGAAACTTATGTTCCAACTGAAGAAATGGATAGCACAAGTAGTACCTCATCTAGTGTAAACCCTGCTGGGGCTAAGGATCACTCACCTTTCTTTCTATCTCCATTTAAAGGTTCAGATCAAAAGCTGTCTCCTAAACTCCATCACCATGCTAATGTTGGTGAAAAAAACATCAATAAACTTCCTCCACTACCCAAGTCAAAACCTAATGCTATAAAGAAAGATGACAACAGATACAGACCAAACCAGGTTTTCAAGTCAGCTTCCACTAGAGAATTCAGATACTTAAAACGTGACGATCGTTTAATCTTTGAAATTGATGATTAG 1707 0.4136 MGCVQAKSLDLEASDYRSLERLKLDNGYVASSDFVAHRRSTGGVANGERQGLAVGVGHKDKLVGRERSKKLSNKCFVDDMVGGWPRWFVDNVPEQVLATLVPKSAESYKMIDKVGQGTYSNVYKALDRDTGEIVALKKVRFNTSEPESIKFMAREIMILQRLDHPNVVKLKGLATSRMQYSLYLVFDFMQTDLARIIARPEERLTEPQVKCYMHQLLSGLQHCHDRGILHRDIKGSNLLIDKNGMLKIADFGLANFYAPDRHQPLTSRVVTLWYRAPELLLGATDYGVGVDLWSAGCLLAEMFKGIPIMPGRTEVEQLHKIFRLCGTPSEEYWRKLKLSTTFRPPKSYRPSLVESFRDLPPSSLGLLCTLLALDPAFRGSASKALKNQFFSTSPLACDLSGLPVTYREDDELVQAKEQIKYMNSKIRRSRTYLERQKNLASKRPIEHTASSKEELIRNVKPETYVPTEEMDSTSSTSSSVNPAGAKDHSPFFLSPFKGSDQKLSPKLHHHANVGEKNINKLPPLPKSKPNAIKKDDNRYRPNQVFKSASTREFRYLKRDDRLIFEIDD* 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2091 568 Pfam Protein kinase domain 108 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2091 568 MobiDBLite consensus disorder prediction 467 484 - -
Apr8g2091 568 ProSitePatterns Serine/Threonine protein kinases active-site signature. 228 240 IPR008271 GO:0004672|GO:0006468
Apr8g2091 568 MobiDBLite consensus disorder prediction 438 486 - -
Apr8g2091 568 ProSitePatterns Protein kinases ATP-binding region signature. 114 137 IPR017441 GO:0005524
Apr8g2091 568 ProSiteProfiles Protein kinase domain profile. 108 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2091 568 PANTHER CYCLIN-DEPENDENT KINASE 64 524 - -
Apr8g2091 568 PANTHER CELL DIVISION PROTEIN KINASE 64 524 - -
Apr8g2091 568 MobiDBLite consensus disorder prediction 438 459 - -
Apr8g2091 568 Gene3D Transferase(Phosphotransferase) domain 1 191 431 - -
Apr8g2091 568 SMART serkin_6 108 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2091 568 Gene3D Phosphorylase Kinase; domain 1 98 190 - -
Apr8g2091 568 MobiDBLite consensus disorder prediction 512 538 - -
Apr8g2091 568 SUPERFAMILY Protein kinase-like (PK-like) 102 395 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2091 Apr-Chr8 31452174 31456452 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2091 103 448 Core Cell Cycle Gene Families AT5G10270 44.505 1.61e-94 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Apr8g2091 Pkinase 5.2e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2091 K08819 - gmx:100776854 927.546