Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2077 ATGCTACAACTTCTCAATCTCTCTTCGACCAATGTCTCTGGCTCCATCCCATCCTCTTTTGGTCAACTCTCCCATCTTCAACTGCTTGACCTCTCCTCAAACTCTCTCACTGGTTCCATTCCTGCTGAACTTGGAAGGCTCTCTTCACTTCAGTTCCTTTTCTTGAACTCCAACAGATTGACAGGAAGCATTCCACAACATCTTGCTAATCTTAGTTCACTTGAAGTTCTTTGCCTCCAAGACAATCTTCTTAACGGGTCAATCCCATCACAGTTAGGCTCTTTGACATCTTTGCAGCAGTTTCGGATAGGGGGTAACCCATATCTCACTGGACAAATCCCATCACAGTTAGGCCTACTCATAAACCTCACCACATTTGGTGCAGCTGCCACTGGACTTTCTGGCTCCATTCCCTCTTCATTCGGTAATTTGATCAATCTACAAACTTTAGCACTTTATGATACTGATATTTCTGGTTCAATACCACCAGAACTCGGGTTGTGCTCAGAGTTGAGAAATCTGTATCTTCACATGAATAAGCTCACTGGCTCTATCCCTTCTCAATTGAGTAAGCTGCAAAAACTTACTAGCTTGCTTCTTTGGGGCAATGCATTGTCAGGGCCAATCCCAGCTGATCTTTCCAATTGTTCATCGCTTGTTATATTCGATGTCTCTTCTAATGACCTCTCAGGTGAAATACCAGGGGACTTTGGGAAGCTGGTGGTTCTGGAACAGCTTCATCTATCAGACAATTCACTCACAGGTAAAATACCATCGCAGTTGAGCAACTGCACTAGTCTGTCCACTGTTCAGCTCGACAAGAATCAGTTATCAGGTACCATTCCATGGCAGGTTGGCAAGTTGAAGGTTTTGCAGAGTTTTTTCTTGTGGGGTAATTTGGTGTCTGGAACCATACCGCCCTCTTTTGGAAACTGCACAGAACTCTACGTACTTGACCTTTCAAGGAACAAGCTAACAGGTTCTATCCCAGAAGAAATTTTCAGCTTGAATAAGCTGAGTAAGCTTCTGCTTCTGGGAAATTCATTAGCAGGAAGGTTGCCACCAAGTGTTGCAAACTGCCAGTCTTTAGTGAGACTGAGGGTTGGAGAAAACCAGCTTTCAGGACACATTCCTAAAGAGATAGGGCAGTTGCAGAATCTGGTGTTTCTTGACTTGTACATGAATCACTTCTCTGGAAACTTACCAGTGGAGATAGCCAACATCACAGTTCTTGAGCTTTTAGATGTGCATAACAACTACCTCACTGGGGAAATTCCATCTGTGATTGGGGAACTTGAAAATTTGGAGCAGCTTGATCTCAGTAGGAACAGTTTGACAGGTGAAATTCCTTGGAGCTTTGGAAACTTCAGCTATTTGAACAAGCTCATCCTCAACAATAACCTGCTGAGTGGATCAATCCCAAAATCCATTAGGAATTTGCAGAAGCTAACTCTACTGGATTTGAGTTACAACAGCCTCTCTGGTAGCATACCATCTGAGATTGGTTATGTTACAAGCTTAACCATCAGTTTGGACTTGAGCTCAAATGCTTTCACAGGAGAAATCCCAGATTCAATGTCTGCTTTGACACAGTTACAATCACTTGACCTTTCTCATAATAGGCTTTATGGAGGAATTGAGATTCTGGGTTCTCTCACTAGTCTCACTTCCCTCAATATCTCCTACAACAATTTCTCAGGTCCTATCCCGGTAACTCCATTCTTCAGAACTCTATCTTCTAATTCATATCTTCAGAACCCCCACCTATGTCAGTCCATTGATGGGACTACATGTTCTTCAAGTCTGATTCGAAAAAATGGTTTGAAATCTGCAAAAACCATAGCTCTGATCACTGTAATTTTAGCCTCAGTTACTATAATTCTCATTGCATCCTGGATTCTAGTAACTCGAGATCACAGGTACAGGGTTTCAAAAACTTTGGGGGCATCAACCTCCACCTCAGGAGCTGAGGATTTCTCTTATCCTTGGACTTTCATTCCATTTCAGAAACTAAACTTCACCATAGATAATATCTTGGATTGCTTGAAAGATGAAAATGTGATTGGAAAGGGTTGCTCTGGTGTTGTGTATAAAGCTGAGATGCCAAATGGGGAGTTGATAGCAGTGAAGAAGCTTTGGAAAGCAAACAAAGCAGATGAAATGGTGGATTCTTTTGCTGCTGAGATTCAGATTCTTGGGTACATTCGGCATAGGAACATTGTGAGGCTCATAGGTTATTGTTCTAACAGAAGTGTCAATCTTCTTCTCTATAACTACATCCCAAATGGTAATCTGAGACAGCTTTTGCAAGGGAACAGGAACTTGGACTGGGAAACTAGATACAAGATTGCTGTTGGATCAGCTCAGGGTCTAGCTTACCTGCATCATGATTGTGTCCCCGCAATTCTTCATAGGGATGTTAAATGCAATAACATACTCCTAGATTCCAAATTTGAGGCATATCTTGCAGATTTTGGTCTTGCAAAGCTAATGAATTCACCAAATTATCATCATGCAATGTCCAGAGTTGCTGGTTCCTATGGTTATATTGCCCCAGAATATGGCTACTCCATGAACATAACAGAGAAGAGTGATGTCTATAGTTATGGGGTGGTTTTGCTAGAGATACTAAGTGGGCGTAGTGCTGTGGAACCCAATGTTGGAGATGGACAACACATAGTTGAGTGGGTGAAGAGGAAGATGGGAAGCTTTGAACCAGCAGTATCAATACTAGACACGAAGCTCCAAGGTCTACCAGATCAAATGGTGCAAGAGATGCTTCAAACACTTGGAATTGCTATGTTCTGTGTGAACTCTTCCCCAACAGAACGCCCCACAATGAAGGAAGTGGTTGCATTGCTAATGGAGGTAAAGAGCCAGCCTGAGGAGATGGCCAAGACCTCTCAGCCTCTAATAAAGCAGTCCTCAAATCACAGTTGA 2940 0.4259 MLQLLNLSSTNVSGSIPSSFGQLSHLQLLDLSSNSLTGSIPAELGRLSSLQFLFLNSNRLTGSIPQHLANLSSLEVLCLQDNLLNGSIPSQLGSLTSLQQFRIGGNPYLTGQIPSQLGLLINLTTFGAAATGLSGSIPSSFGNLINLQTLALYDTDISGSIPPELGLCSELRNLYLHMNKLTGSIPSQLSKLQKLTSLLLWGNALSGPIPADLSNCSSLVIFDVSSNDLSGEIPGDFGKLVVLEQLHLSDNSLTGKIPSQLSNCTSLSTVQLDKNQLSGTIPWQVGKLKVLQSFFLWGNLVSGTIPPSFGNCTELYVLDLSRNKLTGSIPEEIFSLNKLSKLLLLGNSLAGRLPPSVANCQSLVRLRVGENQLSGHIPKEIGQLQNLVFLDLYMNHFSGNLPVEIANITVLELLDVHNNYLTGEIPSVIGELENLEQLDLSRNSLTGEIPWSFGNFSYLNKLILNNNLLSGSIPKSIRNLQKLTLLDLSYNSLSGSIPSEIGYVTSLTISLDLSSNAFTGEIPDSMSALTQLQSLDLSHNRLYGGIEILGSLTSLTSLNISYNNFSGPIPVTPFFRTLSSNSYLQNPHLCQSIDGTTCSSSLIRKNGLKSAKTIALITVILASVTIILIASWILVTRDHRYRVSKTLGASTSTSGAEDFSYPWTFIPFQKLNFTIDNILDCLKDENVIGKGCSGVVYKAEMPNGELIAVKKLWKANKADEMVDSFAAEIQILGYIRHRNIVRLIGYCSNRSVNLLLYNYIPNGNLRQLLQGNRNLDWETRYKIAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKFEAYLADFGLAKLMNSPNYHHAMSRVAGSYGYIAPEYGYSMNITEKSDVYSYGVVLLEILSGRSAVEPNVGDGQHIVEWVKRKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPTERPTMKEVVALLMEVKSQPEEMAKTSQPLIKQSSNHS* 980
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2077 979 Gene3D Transferase(Phosphotransferase) domain 1 760 977 - -
Apr8g2077 979 Pfam Protein kinase domain 684 951 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2077 979 ProSiteProfiles Leucine-rich repeat profile. 531 553 IPR001611 GO:0005515
Apr8g2077 979 Pfam Leucine rich repeat 2 60 IPR001611 GO:0005515
Apr8g2077 979 Pfam Leucine rich repeat 291 349 IPR001611 GO:0005515
Apr8g2077 979 SMART serkin_6 682 958 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2077 979 Gene3D Ribonuclease Inhibitor 79 184 IPR032675 -
Apr8g2077 979 Gene3D Ribonuclease Inhibitor 378 472 IPR032675 -
Apr8g2077 979 Gene3D Ribonuclease Inhibitor 282 377 IPR032675 -
Apr8g2077 979 PANTHER - 2 975 - -
Apr8g2077 979 Gene3D Ribonuclease Inhibitor 185 281 IPR032675 -
Apr8g2077 979 Gene3D Ribonuclease Inhibitor 473 600 IPR032675 -
Apr8g2077 979 SUPERFAMILY L domain-like 281 599 - -
Apr8g2077 979 ProSiteProfiles Protein kinase domain profile. 682 972 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2077 979 Pfam Leucine Rich Repeat 434 456 IPR001611 GO:0005515
Apr8g2077 979 Gene3D Phosphorylase Kinase; domain 1 653 759 - -
Apr8g2077 979 Gene3D Ribonuclease Inhibitor 1 74 IPR032675 -
Apr8g2077 979 SMART LRR_sd22_2 432 461 - -
Apr8g2077 979 SMART LRR_sd22_2 23 44 - -
Apr8g2077 979 SMART LRR_sd22_2 529 554 - -
Apr8g2077 979 SMART LRR_sd22_2 480 506 - -
Apr8g2077 979 SMART LRR_sd22_2 47 73 - -
Apr8g2077 979 PRINTS Leucine-rich repeat signature 26 39 - -
Apr8g2077 979 PRINTS Leucine-rich repeat signature 529 542 - -
Apr8g2077 979 SMART LRR_typ_2 240 264 IPR003591 -
Apr8g2077 979 SMART LRR_typ_2 529 556 IPR003591 -
Apr8g2077 979 SMART LRR_typ_2 144 168 IPR003591 -
Apr8g2077 979 SMART LRR_typ_2 312 336 IPR003591 -
Apr8g2077 979 SMART LRR_typ_2 432 455 IPR003591 -
Apr8g2077 979 SMART LRR_typ_2 480 504 IPR003591 -
Apr8g2077 979 SMART LRR_typ_2 192 216 IPR003591 -
Apr8g2077 979 SMART LRR_typ_2 71 95 IPR003591 -
Apr8g2077 979 SMART LRR_typ_2 23 47 IPR003591 -
Apr8g2077 979 ProSitePatterns Protein kinases ATP-binding region signature. 688 711 IPR017441 GO:0005524
Apr8g2077 979 SUPERFAMILY Protein kinase-like (PK-like) 664 954 IPR011009 -
Apr8g2077 979 ProSitePatterns Serine/Threonine protein kinases active-site signature. 802 814 IPR008271 GO:0004672|GO:0006468
Apr8g2077 979 SUPERFAMILY RNI-like 5 311 - -
Apr8g2077 979 PANTHER UNNAMED PRODUCT 2 975 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2077 Apr-Chr8 31315167 31318348 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2077 2 973 Receptor kinase-like Gene Family AT5G56040 46.083 0.0 836
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Apr8g2077 Pkinase 2.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2077 - - gmx:100819611 1761.5