Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2064 ATGGGTGAGGCTTCGGAACCTGCTTCCGCTGATTGTTTCAGCAAGATGATGTCGTCGATGCCGGGTTTTCGCTTTCATCCCACGGATGAGGAGCTGGTGATGTACTATCTGAAGCGGAAGATTTGCGGGAAGAAGCTGAATCTCAACGTGATTCGCGAAACTGATGTGTACAAGTGGGATCCCGAGGATTTGCCTGGGCTATCTATACTGAGAACTGGAGATAGGCAATGGTTCTTTTTCTGTCACCGAGATAGGAAGTATCCTAATGGTGGAAGGTCTAATCGAGCAACCAAACACGGGTACTGGAAAGCAACAGGAAAGGATCGTAATGTGATGTGCAATTCTAGGGATGTTGGAGTGAAAAAGACACTCGTTTACTATGTAGGCAGAGCTCCTAATGGTAAGCGGACTGATTGGGTCATGCATGAATACACCATGGATGAAGAGGAGCTCAAGAGATGCCAGGGTGTTAAGGACTATTATGCACTTTACAAGGTTTACAAGAAAAGTGGACCTGGGCCTAAAAATGGTGAACAGTACGGTGCACCATTTAATGAAGAAGAGTGGGCAGATGAAGATATTGTAGATTTTAATAATAAAGCAGCTGATCGGGAGGCTCCTAATGCTCTCACCGAGACTGTTAATGACCAGATGCAACGTTTGTTTGATGATGAAATTGATATCATTAAAGAAATCTTGGATGATGATCTTGTCCTTGACCCGCAGCATGTGGGTGGTTATCCTGACTTTCCTCAGGTTGTTACAGAAGAAACACAAAGTACTGTCGTGGATCAAATCTCTGAGGCTATGATATTCCCTGAGCCAAGCAGAATCTTTGATTCTAACACATCTGAGGTCTCTTCTGCTCCCAACATTCAAATTGAGGGGCTTGACTTTCAAGAGGATGGCTTCTTGGAAATTAATGATCTCGTTGATACTGAACCTGCACTTTCGAATGTGGAAAAGCCCGTGGAGAACCTGCAGTATGAAGATGGGTTAAGTGAACTTGATCTGTTCCAAGATGCAGAGATGTTTCTTCGTGACTTGGGGCCAATTCTTCACGAAACAGATTCCCATGTGTATTTGAATACCCATTACAACAATACTGAAAATCAAAATTACCAGTTCTTGCCCAATCCAGAGGATGCCAATCAAACCGATGGTGAATTCTGGATGCGTGGTGACGGAAACACCCTCAGTCCATCAGAAGGCTTTGTTGATTCTTTATCTCCATCGAACCCAGGTGTTGTATGTGAATCTGTCAGCTTTGCTACCGAAGGCAATAACAATCAAAGTAGCACCGTAGAAGACATTGCTACTAGTAGATTCTCCTCTGCTCTCTGGGCCTTTGTTGAGTCAATACCTACTACTCCTGCATCAGCTGCTGAAAGTGATTTGGTGAACCGAGCTTTGAATCGAATGTCTAGCTTCAGCAGGGTAAAGACCAAACACACAAACTTTGCTGCAGGTAACGACACTGCAACTGTGAAGAGAGCAGGCAGAAAGGGACTTTCATTCCTTTTCTTCTCAATTATTATTGCTTTATGTGCTTTCATGTGGGTTTCTATTGGAAATTTAAGACTATTAGGGAGATGCATCTCTCCTTGA 1608 0.4372 MGEASEPASADCFSKMMSSMPGFRFHPTDEELVMYYLKRKICGKKLNLNVIRETDVYKWDPEDLPGLSILRTGDRQWFFFCHRDRKYPNGGRSNRATKHGYWKATGKDRNVMCNSRDVGVKKTLVYYVGRAPNGKRTDWVMHEYTMDEEELKRCQGVKDYYALYKVYKKSGPGPKNGEQYGAPFNEEEWADEDIVDFNNKAADREAPNALTETVNDQMQRLFDDEIDIIKEILDDDLVLDPQHVGGYPDFPQVVTEETQSTVVDQISEAMIFPEPSRIFDSNTSEVSSAPNIQIEGLDFQEDGFLEINDLVDTEPALSNVEKPVENLQYEDGLSELDLFQDAEMFLRDLGPILHETDSHVYLNTHYNNTENQNYQFLPNPEDANQTDGEFWMRGDGNTLSPSEGFVDSLSPSNPGVVCESVSFATEGNNNQSSTVEDIATSRFSSALWAFVESIPTTPASAAESDLVNRALNRMSSFSRVKTKHTNFAAGNDTATVKRAGRKGLSFLFFSIIIALCAFMWVSIGNLRLLGRCISP* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2064 535 SUPERFAMILY NAC domain 15 169 IPR036093 GO:0003677|GO:0006355
Apr8g2064 535 Gene3D NAC domain 28 171 IPR036093 GO:0003677|GO:0006355
Apr8g2064 535 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 18 534 - -
Apr8g2064 535 Pfam No apical meristem (NAM) protein 21 145 IPR003441 GO:0003677|GO:0006355
Apr8g2064 535 ProSiteProfiles NAC domain profile. 19 169 IPR003441 GO:0003677|GO:0006355
Apr8g2064 535 PANTHER NAC TRANSCRIPTION FACTORS 2 18 534 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2064 Apr-Chr8 31243256 31248803 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2064 12 533 NAC Transcription Factor Family AT1G34190 45.341 2.91e-135 402
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Apr8g2064 NAM 6.5e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2064 - - gmx:100794925 843.188