Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2053 ATGGAGAGAAAGTTCTGGGCTTTAGGTTTCATTTGGTGGGTCTTGTTGGTTCATCCACCATGGCTGATTTCTGCTAACATGGAAGGTGATGCTTTACATAGTCTGAGGACAAATTTACTAGATCCTAATAATGTTTTGCAAAGTTGGGATCCTACACTTGTGAATCCATGCACATGGTTTCATGTAACTTGCAACAATGATAATAGTGTCATAAGGGTTGATTTGGGAAATGCTGCTTTGTCTGGTCAACTTGTTCCACAACTTGGTCAGCTCAAGAATTTGCAGTATTTCAATAACATTACTGGTCCTATTCCAAGTGACCTGGGGAATCTTACTAACTTGGTGAGCTTGGATCTGTACCTAAACCGTTTCACTGGCCCTATCCCAGATTCATTGGGCAAATTGTCAAAATTGCGTTTCCTCCGGCTTAACAACAACAGTCTGACGGGTCTTATTCCCATGACATTGACTAATATTTCATCTCTGCAAGTTCTGGATTTGTCTAATAACCGTCTATCAGGCGTGGTTCCTGATAATGGCTCTTTTTCATTATTCACTCCTATCAGTTTTGCAAACAACTTGGATCTTTGTGGCCCGGTCACTGGGCACCCTTGTCCTGGCTCTCCTCCATTTTCTCCTCCACCTCCTTTTGTCCCTCCACCCCCAATTTCTCCCCCAGGAGGTAATAGTGCCACTGGGGCAATAGCTGGAGGAGTTGCAGCAGGTGCTGCTCTATTATTTGCTGCACCTGCAATTGCTTTTGCATGGTGGCGTCGAAGGAAACCGCAAGAATTTTTCTTTGACGTTCCTGCTGAAGAGGATCCTGAAGTCCATCTTGGACAGCTTAAGAGGTTCTCACTACGAGAACTGCAAGTTGCGACAGATAGTTTCAGCAATAAGAATATTCTTGGGAGGGGAGGATTTGGTAAAGTGTACAAAGGACGCTTGGCAGATGGTTCATTGGTGGCTGTTAAAAGATTGAAAGAGGAGCGCACTCCTGGTGGAGAGCTTCAGTTTCAGACTGAAGTAGAGATGATTAGCATGGCTGTGCATAGAAATCTCCTCCGTCTGCGGGGGTTCTGTATGACACCAACAGAAAGGCTACTTGTTTATCCCTACATGGCTAATGGAAGTGTTGCGTCGTGCTTAAGAGAGCGTCCTGCTCATCAAGAACCCCTGGATTGGCCAACTAGAAAAAGAATAGCTTTGGGATCAGCAAGGGGTCTTTCATATTTGCATGATCATTGTGACCCAAAGATTATTCATCGTGATGTGAAAGCTGCAAACATATTGTTGGATGAAGAGTTTGAGGCTGTCGTTGGGGACTTTGGATTGGCAAAACTTATGGATTACAAGGACACCCATGTGACAACTGCTGTACGGGGCACAATTGGGCATATAGCTCCTGAGTACCTATCCACTGGTAAATCTTCAGAAAAAACTGATGTCTTTGGTTATGGCATCATGCTTCTGGAGCTGATCACTGGACAGAGAGCTTTTGACCTTGCTCGGCTTGCTAATGATGATGATGTTATGCTGCTTGATTGGGTCAAAGGACTTCTGAAAGAGAAAAAGCTTGAAATGTTGGTTGATCCTGATCTACATAACAACTATATAGAAGCTGAGGTAGAACAGTTAATCCAGGTTGCACTGCTCTGCACACAAGGTTCCCCTATGGAGCGACCTAAGATGTCAGAAGTGGTGAGAATGCTTGAAGGTGATGGCTTGGCAGAAAGGTGGGATGAGTGGCAAAAAGTTGAGGTTCTTCGCCAGGAGGTGGAGCTGGCCCCTCATCCCAATTCTGATTGGATTGTCGACTCGACCGAGAATCTACATGCAGTTGAGTTATCTGGTCCAAGGTGA 1863 0.4493 MERKFWALGFIWWVLLVHPPWLISANMEGDALHSLRTNLLDPNNVLQSWDPTLVNPCTWFHVTCNNDNSVIRVDLGNAALSGQLVPQLGQLKNLQYFNNITGPIPSDLGNLTNLVSLDLYLNRFTGPIPDSLGKLSKLRFLRLNNNSLTGLIPMTLTNISSLQVLDLSNNRLSGVVPDNGSFSLFTPISFANNLDLCGPVTGHPCPGSPPFSPPPPFVPPPPISPPGGNSATGAIAGGVAAGAALLFAAPAIAFAWWRRRKPQEFFFDVPAEEDPEVHLGQLKRFSLRELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPAHQEPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDPDLHNNYIEAEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGDGLAERWDEWQKVEVLRQEVELAPHPNSDWIVDSTENLHAVELSGPR* 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2053 620 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 13 620 - -
Apr8g2053 620 Gene3D Phosphorylase Kinase; domain 1 266 373 - -
Apr8g2053 620 ProSitePatterns Protein kinases ATP-binding region signature. 303 325 IPR017441 GO:0005524
Apr8g2053 620 PANTHER LEUCINE-RICH REPEAT DOMAIN, L DOMAIN-LIKE PROTEIN-RELATED 13 620 IPR031048 GO:0004675|GO:0005102|GO:0006468
Apr8g2053 620 ProSiteProfiles Protein kinase domain profile. 297 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2053 620 ProSiteProfiles Leucine-rich repeat profile. 161 182 IPR001611 GO:0005515
Apr8g2053 620 SUPERFAMILY L domain-like 29 187 - -
Apr8g2053 620 PRINTS Leucine-rich repeat signature 138 151 - -
Apr8g2053 620 PRINTS Leucine-rich repeat signature 159 172 - -
Apr8g2053 620 Gene3D Transferase(Phosphotransferase) domain 1 374 591 - -
Apr8g2053 620 SUPERFAMILY Protein kinase-like (PK-like) 276 572 IPR011009 -
Apr8g2053 620 Pfam Leucine rich repeat N-terminal domain 25 65 IPR013210 -
Apr8g2053 620 SMART serkin_6 297 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2053 620 Gene3D Ribonuclease Inhibitor 24 207 IPR032675 -
Apr8g2053 620 Pfam Protein kinase domain 298 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2053 620 ProSitePatterns Serine/Threonine protein kinases active-site signature. 420 432 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2053 Apr-Chr8 31168413 31175316 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2053 1 620 Receptor kinase-like Gene Family AT1G71830 88.160 0.0 1032
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Apr8g2053 Pkinase 9.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2053 K13418 - gmx:100789884 1116.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g1422 6 22605093 22612411 Apr8g2053 8 31168413 31175316 PCT