Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2042 ATGAAGCTCCGAACACAAGAACAACCTCTGCTACTGTCTTTTGTCTTATTCTATGCCGTCATCTCCACCATTGGAGAAACCATCACTATCTCACCAGGCACGACCCTTTACGCATCCAACACAACCCAATCATGGTCCTCTCCCAACAACACTTTCTCTCTCCACTTCCTTCCTCTTCACTCCCCAACTTCCCCTCCTTCCTTCTTTGCCGCCGTTGTCTACTCCGGCGGCGCACCCGCCGTCTGGTCCGCCGGAAATGGCGCCACCGTGGACTTCGGCGGGTCCCTTCGGTTCCTTCCCGCCGGGAATCTTCGGCTTGTTAATGGGTCGGGTTTCACTGTGTGGGACTCTGGAACTTCCAACATGGGTGTTTCTTCTGCCACGCTTCATGATAATGGAAACTTGATTCTCTCCAATGCCAGTGGTTCCGTGTGGTCAAGCTTTGATAACCCTACTGATACCATTGTGCCGTCTCAGAATTTCACTGTTGGTATGGTTTTGCGTTCTGGGTTGTACTCATTTTCTGTTCTTAAGTCTGGGAACCTTACCCTCAAATGGAGTGATAGTGTGCCTTATTGGGATCAAGGCTTGAACTCTTCGATGAGTATGGTGAATTTGAGTTCGCCTGTTTTGGGGTTGCAATCGAGGGGAATTTTGCAGCTTATTTATCAGAATTTGAGTGCCCCTTTGGTTGTTGCGTTTAGTAGTGATTATGATGAAGGGAGTGACGTGTTAAGGGTTTTGAAGTTGGATGGTGATGGGAATTTGAGGATTTATAGCTCTAAGAGGGGTAGTGGGGGTGTGAATGTGGGGTGGGTTGCTGTTGAGGATCAATGTGAGGTTTTTGGTTACTGTGGAAATAATGGTGTTTGTAGTTATAACGATTCTAATCCCATTTGTGGGTGTCTATCTAAGAATTTTGAGATGGTTGATCCTAGTGATAGTAGGAAAGGGTGTAAGAGGAAGGTGAGGCTTGAGGATTGTGTAGGGAAGGTGGCTATGTTGCAAGTAGAACATGCTCGATTCTTGACATACCCTCCTCAGTTTTTGATCAATCCTGAGGTGTTTTTCGTTGGTATATCAGCTTGCAGTGGAAATTGTCTTGCAGCCAGTGCTTGTTTTGCTTCCACTGCCTTGTCAGATGGAACTGGACTTTGTTACATTAAGACGACTAATTTTATTAGTGGATACCATAATCCTGCTTTACCTAGCACTTCATTTATTAAGGTTTGTGGACCATTGGCTCCAAATTCAGCACCTTCTCTGGGGAATGCTGGAGAGGGGAAGAAGTGGAGGGTACGTGCTTGGGTGGTAGCTCTTGTTGTTTTGAGTACCCTTTTGGGTTTCCTTGTCTTTGAGGGTGGTTTATGGTTGTGGTGTTGCAGAAACAGCTCGGGAATTGGAGGGTTCGTGGCTCAGTATGCACTTCTTGAGCATGCTTCTGGTGCACTAATCCATTTCTCTTATAAGGAGCTCCAAAGATCAACAAAGGGGTTCAAGGAGAAACTTGGTGATGGGGGATTTGGTGCTGTTTATAGAGGAATTCTTTCTAATCAAACTGTTGTTGCAGTCAAGCAACTTGAGGGCATTGAGCAGGGAGAGAAACAGTTTAGGATGGAAGTTTCTACCATAAGTAGTACTCATCATCTGAATTTAGTGAGGCTGATTGGTTTTTGCTCTGAAGGGCGTCACAGGCTTCTAGTATATGAGTTTATGAAAAATGGATCTCTTGATGAATTTCTTTTTGTTAATGAAGAACAACAATCTGGAAAATTGTTGAACTGGGGTTATAGATTCAACATTGCCCTTGGTGCCGCTAGGGGCTTGACATACCTTCACGAGGAGTGTAGAAACTGCATTGTCCATTGTGATGTAAAACCTGAAAACATACTTTTAGATGAGAATTACATTGCAAAAGTCTCAGATTTTGGCCTTGCAAAGCTCTTAGGTCCAGTGGATCATAGACACCGAACCTTGACAAGTGTGAGAGGAACCAGAGGGTATTTAGCTCCAGAATGGCTTGCAAATCTTCCCATAAATTCCAAATGTGATGTTTACAGTTATGGTATGGTTTTGTTGGAGATAGTGAGTGGTAGAAGGAACTTTGAAATCTCAGAAGAAACAAGTAAAAAAAAGTTCTCCATCTGGGCTTATGAAGAGTTAGAGAAAGGTAACATCATGGGAGTTATTGACAGAAGATTGGTTAGCCAAGAAATAAACTTGGAACAAGTGAAAAGAGTGCTTTTGGCATGTTTTTGGTGCATACAGGAGCAGCCATCTCAGAGGCCAACTATGGGCAAAGTTGTGCAAATGCTAGAAGGTGTGACAGATATTGAGAAGCCACCAGCCCCAAAAATCAATAGCAATGCCTCTGCTATCTCCACTATTGTAACTTCATCAGCTCCAACCTGCTCCTCATCTTCATCTTTGTTGACTTTGGAGGTTTCTCCCTTGGCTTTAGAAGGAGCACAGAGAACATGA 2481 0.4418 MKLRTQEQPLLLSFVLFYAVISTIGETITISPGTTLYASNTTQSWSSPNNTFSLHFLPLHSPTSPPSFFAAVVYSGGAPAVWSAGNGATVDFGGSLRFLPAGNLRLVNGSGFTVWDSGTSNMGVSSATLHDNGNLILSNASGSVWSSFDNPTDTIVPSQNFTVGMVLRSGLYSFSVLKSGNLTLKWSDSVPYWDQGLNSSMSMVNLSSPVLGLQSRGILQLIYQNLSAPLVVAFSSDYDEGSDVLRVLKLDGDGNLRIYSSKRGSGGVNVGWVAVEDQCEVFGYCGNNGVCSYNDSNPICGCLSKNFEMVDPSDSRKGCKRKVRLEDCVGKVAMLQVEHARFLTYPPQFLINPEVFFVGISACSGNCLAASACFASTALSDGTGLCYIKTTNFISGYHNPALPSTSFIKVCGPLAPNSAPSLGNAGEGKKWRVRAWVVALVVLSTLLGFLVFEGGLWLWCCRNSSGIGGFVAQYALLEHASGALIHFSYKELQRSTKGFKEKLGDGGFGAVYRGILSNQTVVAVKQLEGIEQGEKQFRMEVSTISSTHHLNLVRLIGFCSEGRHRLLVYEFMKNGSLDEFLFVNEEQQSGKLLNWGYRFNIALGAARGLTYLHEECRNCIVHCDVKPENILLDENYIAKVSDFGLAKLLGPVDHRHRTLTSVRGTRGYLAPEWLANLPINSKCDVYSYGMVLLEIVSGRRNFEISEETSKKKFSIWAYEELEKGNIMGVIDRRLVSQEINLEQVKRVLLACFWCIQEQPSQRPTMGKVVQMLEGVTDIEKPPAPKINSNASAISTIVTSSAPTCSSSSSLLTLEVSPLALEGAQRT* 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2042 826 CDD STKc_IRAK 503 774 - -
Apr8g2042 826 PIRSF SRK 4 820 IPR024171 GO:0004674
Apr8g2042 826 ProSiteProfiles Bulb-type lectin domain profile. 152 271 IPR001480 -
Apr8g2042 826 Gene3D Phosphorylase Kinase; domain 1 471 571 - -
Apr8g2042 826 SMART blect_4 27 151 IPR001480 -
Apr8g2042 826 SUPERFAMILY Protein kinase-like (PK-like) 481 773 IPR011009 -
Apr8g2042 826 PANTHER OS07G0415500 PROTEIN 13 810 - -
Apr8g2042 826 ProSiteProfiles Bulb-type lectin domain profile. 27 150 IPR001480 -
Apr8g2042 826 ProSiteProfiles Protein kinase domain profile. 497 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2042 826 PANTHER G-TYPE LECTIN S-RECEPTOR SERINE/THREONINE-PROTEIN KINASE 13 810 - -
Apr8g2042 826 SUPERFAMILY alpha-D-mannose-specific plant lectins 80 196 IPR036426 -
Apr8g2042 826 SMART serkin_6 497 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g2042 826 ProSitePatterns Serine/Threonine protein kinases active-site signature. 620 632 IPR008271 GO:0004672|GO:0006468
Apr8g2042 826 Gene3D Transferase(Phosphotransferase) domain 1 572 793 - -
Apr8g2042 826 Gene3D - 150 266 IPR036426 -
Apr8g2042 826 ProSitePatterns Protein kinases ATP-binding region signature. 503 525 IPR017441 GO:0005524
Apr8g2042 826 Pfam S-locus glycoprotein domain 241 304 IPR000858 GO:0048544
Apr8g2042 826 Pfam D-mannose binding lectin 90 164 IPR001480 -
Apr8g2042 826 Gene3D - 24 149 IPR036426 -
Apr8g2042 826 Pfam Protein kinase domain 500 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2042 Apr-Chr8 31068088 31071613 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2042 473 782 Receptor kinase-like Gene Family AT5G20050 41.925 4.15e-78 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Apr8g2042 Pkinase 1.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2042 - - gmx:100810753 1375.53