Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2039 ATGGAACCTCTCCCTGCCACCAAACACAACAACAATCCAACAAAGCCATCTTCACTACACCTGGAGGATCCCGCCACAGAGCCCAGTCCTCTCCGGAAAATAATAGTGGTGGCCTCCATAGCTGCCGGGGTGCAATTCGGGTGGGCCCTACAGCTCTCCCTGTTGACTCCATACGTCCAGTTGCTTGGCATCCCTCACACTTGGGCCGCCTTCATCTGGCTATGCGGCCCAATCTCCGGCATGCTCGTCCAGCCCATAGTCGGCTACCACAGTGACCGCTGCACCTCCCGCTTTGGTCGCCGACGTCCCTTTATTGCCGCCGGCGCTCTTGCCGTCGCCATCGCCGTCTTCCTCATCGGCTATGCCGCAGACCTCGGCCACTCGTTCGGCGACTCCCTTGCTAAGAAAACCCGCCCCCGAGCCATCGCCATCTTTGTCGTGGGTTTCTGGATCCTCGACGTCGCCAACAACATGCTCCAGGGCCCCTGCCGTGCCCTCCTCGCCGACCTCGCCGCCGGCGACCACCGCAAAACCAGAACCGCCAACGCCTTCTTCTCCTTCTTCATGGCAGTCGGCAACGTCCTCGGTTATGCCGCCGGCTCCTACAGCGGCCTCCACCACGTGTTCCCCTTCACGAAAACGAAGGCCTGTGACGTCTACTGTGCGAACTTGAAGAGCTGCTTCTTCCTCTCCATTGCGCTTCTCTTGGTGCTTGCCACCGCGGCCATGACCTACGTGAAGGAGAAAACGCTCTCACGAGAGAAGAACGTTAACGCGGAAACTGAGGAGGACGGTGGTGGGTCACGTGGAGGCATGCCTTGTTTTGGGCAGTTATTTGGTGCATTTCGGGAGCTTCAGAGACCCATGTGGATCCTTCTGTTGGTGACGTGTCTGAATTGGATTGCATGGTTCCCTTTCTTGCTTTTTGACACAGATTGGATGGGGAGAGAGGTGTACGGGGGAAAGGTTGGAGAAGGTAAGGCCTACGATAAGGGCGTGCGCGCGGGTGCTTTGGGCCTCATGTTGAATTCTGTTGTGCTCGGTGTGACGTCGTTGGGCGTGGAGATCCTCGCGCGTGGGGTTGGGGGCGTGAAGAGGTTGTGGGGAATTGTTAACTTCTTGCTGGCTATTTGTTTGGCCATGACCGTTTTGGTCACCAAGTTGGCCGAGCATTCTCGCCACTTCGCTCCTGGCCAATCCGACCCTCTTCCTCCTCCCGGCGGCGTGAAGGCCGGCGCGTTGGCTCTCTTTTCCGTCCTTGGAATCCCTCTTGCGATTACTTACAGCATCCCATTTGCTTTGGCATCAATATTCTCCAGCACCTCAGGGGCAGGCCAGGGGTTGTCTCTAGGAGTTCTCAATCTTGCAATTGTCATACCACAGATGGTGGTGTCTGTGGTGAGTGGACCATGGGATGCTCTGTTTGGTGGTGGAAACTTGCCAGCGTTTGTGGTGGGTGCTGTGGCGGCTGCGGCCAGTGGGCTTCTATCCATAATTCTGCTGCCATCTCCGCCGCCGGATTTGGCCAAAGCTGCCACCGCAGCCGGAGGAGGGTTCCATTAA 1563 0.5777 MEPLPATKHNNNPTKPSSLHLEDPATEPSPLRKIIVVASIAAGVQFGWALQLSLLTPYVQLLGIPHTWAAFIWLCGPISGMLVQPIVGYHSDRCTSRFGRRRPFIAAGALAVAIAVFLIGYAADLGHSFGDSLAKKTRPRAIAIFVVGFWILDVANNMLQGPCRALLADLAAGDHRKTRTANAFFSFFMAVGNVLGYAAGSYSGLHHVFPFTKTKACDVYCANLKSCFFLSIALLLVLATAAMTYVKEKTLSREKNVNAETEEDGGGSRGGMPCFGQLFGAFRELQRPMWILLLVTCLNWIAWFPFLLFDTDWMGREVYGGKVGEGKAYDKGVRAGALGLMLNSVVLGVTSLGVEILARGVGGVKRLWGIVNFLLAICLAMTVLVTKLAEHSRHFAPGQSDPLPPPGGVKAGALALFSVLGIPLAITYSIPFALASIFSSTSGAGQGLSLGVLNLAIVIPQMVVSVVSGPWDALFGGGNLPAFVVGAVAAAASGLLSIILLPSPPPDLAKAATAAGGGFH* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2039 520 PANTHER SUGAR TRANSPORTER 23 511 - -
Apr8g2039 520 Gene3D MFS general substrate transporter like domains 27 512 IPR036259 -
Apr8g2039 520 MobiDBLite consensus disorder prediction 1 25 - -
Apr8g2039 520 TIGRFAM GPH_sucrose: sucrose/H+ symporter 30 506 IPR005989 GO:0005887|GO:0008515|GO:0015770
Apr8g2039 520 Pfam MFS/sugar transport protein 42 300 - -
Apr8g2039 520 PANTHER SUCROSE TRANSPORT PROTEIN SUC7-RELATED 23 511 - -
Apr8g2039 520 CDD MFS_SLC45_SUC 34 480 - -
Apr8g2039 520 SUPERFAMILY MFS general substrate transporter 32 505 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2039 Apr-Chr8 31015222 31018835 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2039 27 520 Sucrose Transporter Gene Family AT1G22710 70.400 0.0 696
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2039 K15378 - gmx:547679 895.575