Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2033 ATGCCAACGCCAACAGCAGCAGCAACAACGGCAAGCTTTGGCGGTGTAGAAACTCCAAATGGAGACTCATCCAACACTTGTGTCCCTCAAGAATCGCGTGACCTTCCTCCTTTAATGTCTTGTTCTTACCCCATCACTCTTAAGTTCATGGACGTGGGATACCGTCTGAAGATAGAGGAGAAACAAAGAAAAGGGACCATCAAGAGGTTGTTTACCACGCACGAGTCATCATCGTCAGACCAAAGATCAACGGCGCAAGAGCGAACCATTCTCAAGGGAGTGACGGGAATAGCCTACCCAGGGGAGATCCTAGCGGTGCTGGGCCCATCAGGGAGCGGAAAATCCACGCTCCTAAACGCGCTCGCAGGGAGGCTCCATGGACACGGCCTCACTGGGACAATCCTCGCCAACTCCAACAAACTCACCAAACCGGTTCTCCGCCGAACCGGGTTCGTCACACAGGATGACATCCTCTACCCTCACCTAACGGTGCGCGAGACCCTCATCTTCTGCTCCATGCTGCGCCTCCCAAGGACCCTGCCACGCGCCGCCAAGGTCGCCGCGGCGGAGTCGGCAATCGCGGAGCTAGGGCTCGGCAAGTGCCAGCACACCATAATCGGAAACAGCTTCATCCGAGGCGTCTCCGGCGGAGAGCGGAAGCGCGTGAGCATCGCGCACGAGATGCTGGTGGACCCTTCTCTCCTCATACTGGACGAGCCTACCTCCGGTTTGGACTCGACGGCGGCACACCGGCTCGTGGTGACGCTGGGGTCATTGGCAAAGAAGGGGAAGACGGTGGTTACGTCGGTGCACCAACCTTCGAGTCGCGTGTACCAGATGTTCAACAAGGTTCTGGTCTTGTCTGAAGGACAGTGTTTGTACTTTGGCAAAGGAAGCGATGCCATGCGCTACTTTCAGTCGGTTGGGTTCGCGCCGTCATTTCCAATGAATCCGGCGGATTTTCTGCTCGATCTCGCTAACGGTGTTTGCCATGTCGATGGTCAAAGTGAAAGAGATAGGCCCAACATAAAACAAAGCCTAGTTAATTCATACAACACAGTATTGGGTCCCAAGGTAAAAACTGCCTGCATGGATACTGCCATTGTTCCTACAAAAAACACACACCCTTTGAGAAGCAGTTCTTCCAAAGAATGTAGACACAGTGACAGGGTTAGCTTCTTTGATTGGTTTTACCAATTCAGAATTCTGCTTCAGAGAAGCCTCAAAGAAAGAAAGCACGAATCCTTCAACACACTGAGAGTCTTTCAAGTCATTGCTGCTGCACTATTAGCTGGTTTAATGTGGTGGCACTCAGAGTATAGGAATATTCAAGATCGGCTTGGGCTACTCTTCTTCATTTCAATCTTTTGGGGAGTCTTCCCATCTTTCAACTCAGTGTTTGCTTTCCCTCAAGAGCGTGCCATCTTCATGAAAGAAAGGGCTTCTGGTATGTACACATTGTCGTCCTATTTTATGGCACGAATAGTTGGAGACCTGCCCATGGAGCTTATTCTTCCCACGATTTTCCTCGTTGTTACATATTGGATGGGTGGTTTAAAGCCTGATTTATGGGCTTTTCTCTTGACTTTGTTGCTTGTTCTTGGATACGTGCTTGTGTCACAGGGTCTTGGGCTTGCTTTAGGTGCAGCAATAATGGATGCAAAACAGGCTTCCACAGTTGCAGCAGTGACAATGCTAGCTTTTGTCTTGACAGGAGGATACTATGTCCATAAGGTGCCATCATGTATGGCTTGGATCAAATATATATCCACAACCTTCTACTGTTATAAGCTGCTGACTAGAATCCAGTATGGGGATGGCAAGAAGATATCATATCTTTTGGGATGCTATCATGGTGACATTGATAGGGCAAACTGCAAATTTGTTGAGGAAGATGTGGTGGGGCAAATTGGCACTGTGGGATGCATTGGGGTATTGTTTTTCATGTTTGTTTCTTACAGATTATTGGCCTACCTTGCCTTGAGGCGCATCAAGAGTTGA 2001 0.4953 MPTPTAAATTASFGGVETPNGDSSNTCVPQESRDLPPLMSCSYPITLKFMDVGYRLKIEEKQRKGTIKRLFTTHESSSSDQRSTAQERTILKGVTGIAYPGEILAVLGPSGSGKSTLLNALAGRLHGHGLTGTILANSNKLTKPVLRRTGFVTQDDILYPHLTVRETLIFCSMLRLPRTLPRAAKVAAAESAIAELGLGKCQHTIIGNSFIRGVSGGERKRVSIAHEMLVDPSLLILDEPTSGLDSTAAHRLVVTLGSLAKKGKTVVTSVHQPSSRVYQMFNKVLVLSEGQCLYFGKGSDAMRYFQSVGFAPSFPMNPADFLLDLANGVCHVDGQSERDRPNIKQSLVNSYNTVLGPKVKTACMDTAIVPTKNTHPLRSSSSKECRHSDRVSFFDWFYQFRILLQRSLKERKHESFNTLRVFQVIAAALLAGLMWWHSEYRNIQDRLGLLFFISIFWGVFPSFNSVFAFPQERAIFMKERASGMYTLSSYFMARIVGDLPMELILPTIFLVVTYWMGGLKPDLWAFLLTLLLVLGYVLVSQGLGLALGAAIMDAKQASTVAAVTMLAFVLTGGYYVHKVPSCMAWIKYISTTFYCYKLLTRIQYGDGKKISYLLGCYHGDIDRANCKFVEEDVVGQIGTVGCIGVLFFMFVSYRLLAYLALRRIKS* 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2033 666 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 86 307 IPR027417 -
Apr8g2033 666 MobiDBLite consensus disorder prediction 1 31 - -
Apr8g2033 666 Pfam ABC transporter 92 242 IPR003439 GO:0005524
Apr8g2033 666 PANTHER ABC TRANSPORTER G FAMILY MEMBER 25 21 664 - -
Apr8g2033 666 CDD ABCG_EPDR 78 296 - -
Apr8g2033 666 Pfam ABC-2 type transporter 271 365 IPR043926 GO:0140359
Apr8g2033 666 Gene3D - 79 308 IPR027417 -
Apr8g2033 666 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 21 664 - -
Apr8g2033 666 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 47 314 IPR003439 GO:0005524
Apr8g2033 666 SMART AAA_5 100 291 IPR003593 -
Apr8g2033 666 MobiDBLite consensus disorder prediction 1 33 - -
Apr8g2033 666 Pfam ABC-2 type transporter 398 603 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2033 Apr-Chr8 30964605 30971261 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2033 101 296 Calmodulin-binding Proteins AT2G36910 31.000 3.79e-12 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2033 K05681 - gmx:100812127 1135.17