Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2022 ATGGGTGATTCCAATTTCACCAAGAATCACATGTTTGAAACTTCCCCTCAACAAAGGGAGGATGGTGCTTGTCTATCAGCAATGCTACTTAGTACTAATCTAGTGTACCCTGCTGTCTTAAATGCAGCCATTGAGCTGAACTTGTTTGGTATCATAGCTAAGGCAACTACACATGATTCATTTATGTCATCCCATGAAATTGCTTCTAAGCTTCCAACACAACACCCTGACTTGCCAAATAGGCTTGACCGCATGTTGCGTTTGCTTGTCAGTTACTCCATTCTTGTTAGTTGCACTCGCACTAGTGAGCATGGTTGCACTGAGAGAGTTTATGGACTCTCACAAGTTGGAAAATACTTAGTCCCCGGTGAAAGTAGGGGCTACTTGGCTTCATTCACAACATTTCTATGTTATCCAGCACTGTCACAGGTTTGGTTGAACTTCAAAGAAGCAGTGGTTGATGAAGACATTGACTTGTTCAACAAAGTCCATGGAGTAACAAAGTACGAGTACATGGAAAAGGATCCAAAAATGAACCAAATTTTTAACAAGTCAATGGCTGATGTGTGTGCAACAGAGATGAAAAGAATACTTGAAATATATACTGGACTTGAGGGAATATCAACATTGGTTGACGTAGGAGGTGGAAATGGACAAAATCTCAAAATGATAATCTCCAAGTACCCTTTAATTAAGGGTATTAATTTTGATCTGCCCCAAGTGATTGAAAATGCACCATCGCTTCCAGGGATTGAGCACATTGGAGGAGATATGTTTGCAAGTGTTCCACGAGGTGACGCCATAATATTGAAGGCTGTATGTCACAATTGGTCAGATGAAAAATGCGTAGAATTTCTAAGCAATTGTCACAAAGCATTGCCATCGAATGGGAAGGTAATTGTTGTGGAATTCATTTTGCCTGAAGAACCAGAACCAAGTGAAGGATCTCAGCTTGTTTCTAATCTTGACAACATCATGTTCATAACGGTTGGTGGAAGGGAAAGAACTGAAAAACAATATGAGAATTTGTGCATGCTCTCTGGATTTTCAAAATTTCAAGTTGCTTGTCGTGCCTTCTCTAGTTTGGGAGTAATGGAATTTTATAAATAA 1110 0.3973 MGDSNFTKNHMFETSPQQREDGACLSAMLLSTNLVYPAVLNAAIELNLFGIIAKATTHDSFMSSHEIASKLPTQHPDLPNRLDRMLRLLVSYSILVSCTRTSEHGCTERVYGLSQVGKYLVPGESRGYLASFTTFLCYPALSQVWLNFKEAVVDEDIDLFNKVHGVTKYEYMEKDPKMNQIFNKSMADVCATEMKRILEIYTGLEGISTLVDVGGGNGQNLKMIISKYPLIKGINFDLPQVIENAPSLPGIEHIGGDMFASVPRGDAIILKAVCHNWSDEKCVEFLSNCHKALPSNGKVIVVEFILPEEPEPSEGSQLVSNLDNIMFITVGGRERTEKQYENLCMLSGFSKFQVACRAFSSLGVMEFYK* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2022 369 PIRSF O-mtase 5 369 IPR016461 GO:0008168
Apr8g2022 369 Gene3D - 4 120 IPR036388 -
Apr8g2022 369 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 28 369 IPR016461 GO:0008168
Apr8g2022 369 PANTHER O-METHYLTRANSFERASE 1 369 IPR016461 GO:0008168
Apr8g2022 369 SUPERFAMILY "Winged helix" DNA-binding domain 21 124 IPR036390 -
Apr8g2022 369 Pfam Dimerisation domain 39 90 IPR012967 GO:0046983
Apr8g2022 369 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 1 369 - -
Apr8g2022 369 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 127 366 IPR029063 -
Apr8g2022 369 Gene3D Vaccinia Virus protein VP39 122 369 IPR029063 -
Apr8g2022 369 CDD AdoMet_MTases 209 306 - -
Apr8g2022 369 Pfam O-methyltransferase domain 145 350 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2022 Apr-Chr8 30863620 30865480 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2022 14 359 Monolignol Biosynthesis Gene Families AT5G54160 50.144 5.19e-116 339
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2022 - - gmx:100787536 641.343