Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2021 ATGAGTTCGAATCCTGCAAGTCCGAACGAGGGAAGAGAGGATGAGGCATGTCTTTATGCTATGTTACTCTGCACAAGTCAAGTGTTTCCTTCAGTACTCAATGCATCTATTGAGTTGAATTTGTTTGACATAATAGCAAATGCAACACCCCATGGCGGAACTGTGTCAGCATCCCAAATTGCTTCTAAGTTGCCAAACCAATACCCAGGTTTGCCTAATAGACTTGAGCGCATGCTGCGTCTCCTTGCAAGCTATTCTCTTCTCACTTGTTCTCCTCACACCAATCAAGATGGTAGCATTGAGAGATTCTTTGGAATCTCAGCTGTTGGAAAGTACTTTGTCAGTGATGAAAAAAGGGGTTGTGCCGGTGCCATTACAAAATTTCTCAACTATCCTGCAATGTCACAACTTTGGCCGAATTTGAAGGATGCAATCCTTGATTCTGAGAACGACCTATTTCAAAAGGTTCATGGAATGCCTTTGTTCAAATACACTGAAAAGGATCCAAAATTGAATAATGCTTTCATCGGTGCAATGGTTAATACCAGCACCATAGAGACGAATAGGATCCTTGAAGTGTATAAAGGATATGAAGGAGTTTCAACCCTGGTTGATGTGGGAGGAAATACAGGAAAAAATCTCCAATTAATAGTCGCAAAGTACCCTACAATTAAGGGTATTAATTTTGATTTGCCCCAAGTTATTGAAAAAGCGCCAGCTTATCCAGGGATAGAAAATGTTGGAGGAGATATGTTTAAGCATGTCCCACAGGGTGATGCCATAATTCTAAAGGGTGTATTGCACAACTGGTCACATGAACAATGCTTGACTGTTTTGAGGAACTGTTACAATGCACTGCCACAAGGTGGAAAGGTGATTGTTATAGAGTTTTTACCATCAGAAGTATCAGAGTCAAATGAATCAAAGCTTATTTTCACCCTCGACAACATCATGTATATCACAAATGGTGGAAAGGAAAGAAGTAACAAGGAATATGAGTCTTTGTGCAAACTCTCTGGATTTTCAAGATTTCAAGTTGCCTGTCGTGCATTCTTTACCTTGGGAATCATCGAATTTTACAAATAA 1086 0.3996 MSSNPASPNEGREDEACLYAMLLCTSQVFPSVLNASIELNLFDIIANATPHGGTVSASQIASKLPNQYPGLPNRLERMLRLLASYSLLTCSPHTNQDGSIERFFGISAVGKYFVSDEKRGCAGAITKFLNYPAMSQLWPNLKDAILDSENDLFQKVHGMPLFKYTEKDPKLNNAFIGAMVNTSTIETNRILEVYKGYEGVSTLVDVGGNTGKNLQLIVAKYPTIKGINFDLPQVIEKAPAYPGIENVGGDMFKHVPQGDAIILKGVLHNWSHEQCLTVLRNCYNALPQGGKVIVIEFLPSEVSESNESKLIFTLDNIMYITNGGKERSNKEYESLCKLSGFSRFQVACRAFFTLGIIEFYK* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2021 361 PIRSF O-mtase 1 361 IPR016461 GO:0008168
Apr8g2021 361 Gene3D - 2 113 IPR036388 -
Apr8g2021 361 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 10 361 - -
Apr8g2021 361 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 128 359 IPR029063 -
Apr8g2021 361 Pfam O-methyltransferase domain 138 342 IPR001077 GO:0008171
Apr8g2021 361 SUPERFAMILY "Winged helix" DNA-binding domain 13 117 IPR036390 -
Apr8g2021 361 CDD AdoMet_MTases 202 295 - -
Apr8g2021 361 Gene3D Vaccinia Virus protein VP39 115 361 IPR029063 -
Apr8g2021 361 PANTHER O-METHYLTRANSFERASE 10 361 IPR016461 GO:0008168
Apr8g2021 361 Pfam Dimerisation domain 32 83 IPR012967 GO:0046983
Apr8g2021 361 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 361 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2021 Apr-Chr8 30859574 30861336 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2021 7 361 Monolignol Biosynthesis Gene Families AT5G54160 46.218 8.10e-107 316
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2021 - - gmx:100798347 445.277