Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2018 ATGAGTTCGAATCCTGCAAGTCCGAACGAGGGAAGAGAGGATGAGGCATGTCTTTATGCTATGTTACTCTGCACAAGTCAAGTGTTTCCTTCAGTACTCAATGCATCTATTGAGTTGAATTTGTTTGACATAATAGCAAATGCAACACCCCATGGCGGAACTGTGTCAGCATCCCAAATTGCTTCTAAGTTGCCAAACCAATACCCAGGTTTGCCTAATAGACTTGAGCGCATGCTGCGTCTCCTTGCAAGCTATTCTCTTCTCACTTGTTCTCCTCACACCAATCAAGATGGTAGCATTGAGAGATTCTTTGGAATCTCAGCTGTTGGAAAGTACTTCGTCAGTGATGAAGAAAGGGGTTGCGCCAGTGCCATTGCAAATTTTCTCAACTATCCTGCAATGTCACAACTTTGGCCAAAATATAAGGAGGTAATTCTTAACGCTGAGGAGGACGACTTATTCAAGAAGGTTCATGGAATATCTTTGTTCGAATATAGAAAAAAGGATGAAACAATGAAAAGCATTTTCAACAAATCCATGGCTAATATTTGCACCATAAACATGAATAGGATCCTTGAAGTGTACAAAGGATTTGAAGGAGTTCCAACCCTAGTTGACGTGGGAGGATGTACGGGACAAAATCTTCGCATGATAATTTCCAAGTACCCTACAATTAAGGGTGTCAATTTTGATTTGCCCCAAGTTGTTGAACAAGCGCCAGCTTATCCAGGAATCCAACATGTTGGAGGAGACATGTTCACTTATGTACCACAGGGTGATGCCATAATTCTTCAGTCTGTATTGCATAATTGGTCAGATGAACAATGCATAAGCCTTTTGAGGAACTGTCACAATGCCCTGCCACAAGATGGAAGGGTGATTATTATAGAGTTCGTAACAGAAGAAGCAACAGAGTCAAATGCCTCAAAACTTGTTGCCGTCCTCGATAATCTCATGTATATAACAAACAGCGGGAAGGAAAGAACTGTGAAGGAATACGAGGCTTTGTGCAAGCTTTCTGGATTCTCAAGATTTCACGTTGCTTGTCGTGCATTCTTCACCATGGGAGTCTTTGAATTTCACAAATAA 1089 0.4141 MSSNPASPNEGREDEACLYAMLLCTSQVFPSVLNASIELNLFDIIANATPHGGTVSASQIASKLPNQYPGLPNRLERMLRLLASYSLLTCSPHTNQDGSIERFFGISAVGKYFVSDEERGCASAIANFLNYPAMSQLWPKYKEVILNAEEDDLFKKVHGISLFEYRKKDETMKSIFNKSMANICTINMNRILEVYKGFEGVPTLVDVGGCTGQNLRMIISKYPTIKGVNFDLPQVVEQAPAYPGIQHVGGDMFTYVPQGDAIILQSVLHNWSDEQCISLLRNCHNALPQDGRVIIIEFVTEEATESNASKLVAVLDNLMYITNSGKERTVKEYEALCKLSGFSRFHVACRAFFTMGVFEFHK* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2018 362 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 128 359 IPR029063 -
Apr8g2018 362 SUPERFAMILY "Winged helix" DNA-binding domain 13 117 IPR036390 -
Apr8g2018 362 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 362 IPR016461 GO:0008168
Apr8g2018 362 Gene3D Vaccinia Virus protein VP39 114 362 IPR029063 -
Apr8g2018 362 Pfam O-methyltransferase domain 138 343 IPR001077 GO:0008171
Apr8g2018 362 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 10 362 - -
Apr8g2018 362 PIRSF O-mtase 1 362 IPR016461 GO:0008168
Apr8g2018 362 Gene3D - 2 113 IPR036388 -
Apr8g2018 362 PANTHER O-METHYLTRANSFERASE 10 362 IPR016461 GO:0008168
Apr8g2018 362 Pfam Dimerisation domain 32 83 IPR012967 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2018 Apr-Chr8 30827135 30829229 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2018 7 352 Monolignol Biosynthesis Gene Families AT5G54160 45.115 2.16e-106 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2018 - - gmx:100798347 445.277