Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Apr8g2001 | ATGGAATACAAAGTGAAAACCACAACATCTTCTCCACCAATCCCAATCCATGTTCCCACTATGCTCTCAAACTCTCCTCCATCTTCATCTTCTTCCCCTCCTTCACATTCTCCAACACCTTTCCCTTCACCCTCTCAGGGTTCTCCTTCTGCTGCTCCACCCTCCCCTCCTCCTCCACCACCACCAGTGGTGGTTAGCCCTTGTGCTGCTTGCAAGATCCTTCGCCGCAGGTGTGTGGAAAAGTGTGTCTTGGCTCCTTATTTTCCTCCCACTGATCCACTCAAGTTCACCATTGCCCATAGAGTCTTTGGTGCAAGCAACATCATCAAATTTTTGCAGGAATTGCCAGAATCTCAGAGAGCAGATGCTGTGAGCAGCATGGTTTATGAAGCAAATGCTAGGATCAGAGACCCAGTTTATGGTTGTGCAGGTGCAATATGTCAACTTCAGAAGCAAGTTAGCGAGCTACAAGCACAGCTGGCTAAAGCACAGGCTGAGCTAGTCAACATGCAGTGCCAACAAGCTAATTTAGTGGCACTAATTTGCATGGAAATGAGTCAATCACAGGATCAGCACATGCCTCAGCCTCAACCTCACGTTGATATGAGCTGCTTCTTAGAGGACAACAGTTTTGGCTCGGCTTGGGAGCCACTTTGGACATGA | 663 | 0.4827 | MEYKVKTTTSSPPIPIHVPTMLSNSPPSSSSSPPSHSPTPFPSPSQGSPSAAPPSPPPPPPPVVVSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPESQRADAVSSMVYEANARIRDPVYGCAGAICQLQKQVSELQAQLAKAQAELVNMQCQQANLVALICMEMSQSQDQHMPQPQPHVDMSCFLEDNSFGSAWEPLWT* | 221 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Apr8g2001 | 220 | ProSiteProfiles | LOB domain profile. | 66 | 167 | IPR004883 | - | |
Apr8g2001 | 220 | MobiDBLite | consensus disorder prediction | 1 | 30 | - | - | |
Apr8g2001 | 220 | Coils | Coil | 146 | 173 | - | - | |
Apr8g2001 | 220 | MobiDBLite | consensus disorder prediction | 1 | 59 | - | - | |
Apr8g2001 | 220 | Pfam | Lateral organ boundaries (LOB) domain | 67 | 164 | IPR004883 | - | |
Apr8g2001 | 220 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 1 | 53 | 208 | - | - | |
Apr8g2001 | 220 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 53 | 208 | - | - | |
Apr8g2001 | 220 | MobiDBLite | consensus disorder prediction | 31 | 59 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Apr8g2001 | Apr-Chr8 | 30675550 | 30676769 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Apr8g2001 | 63 | 220 | AS2 family | AT1G07900 | 71.605 | 5.81e-79 | 233 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | LOB | Apr8g2001 | LOB | 2.7e-41 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Apr8g2001 | - | - | gmx:100806667 | 334.339 |