Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1998 ATGGGGAGGAAAGGGGGTTGGTTTTCTGCAGTGAAGAGAATTTTCAGTTCTGATTCCAAAAAGGATCAGAAACCTCATCATCATAAGTCGAAGATAGCATGTTTTGGGCATCATCATCCTGAGGATCTAGAAAGGGAAACTGAAGGAGTAGCAATTGTTGCTCCCTCACTTCCACCTAGAAAAGACAAAAAACCAAGAAGTGAGGCAGAGAACGAACAGAGCAAGCAAGCTTTTTCTTTGGTTTTGGCAACTGCTGTGGCTGCAGGAGCTGCCGTTGCTGCTGCTCAAGCTGCTGCAGAGGTTGCTCGTCTCACAAGTGTGCCTCGTTACCCAGGAAAAACCGATGAAGAAGTAGCAGCCATTAAGATTCAGAAGACATATCGTGGACACTTGGCAAGAAGAAAATTGCGTGGCTTGAGAGGATTGGCGAGGTTGAAAACATTGGTGCAAGGACAATCTGTTCAACGGCAAGCAGCTACCACCTTACAATGCATGCAAACTCTTTCACGATTGCAGGCTCAGGTTCGTGCACGGAGGATCAAAATGTCTGAGCAGAATCAGGCTCTTCAAAGGCAAATGCAGCAGAAACGTGAAAAGGAACTGCAAAATGCCGTAAGCAATCAGGCTGGAGAAAAATGGGATGATAGCTCGCATTCAAAGGAGCAAATTGAAGCAAAGTTGTTGAACAGGCAAGTAGCTGCTATGAGAAGAGAGAGGGCCTTGGCCTATGCATCAACACATCAGCAAACGTGGAAGAACACTTCAAAACCTTCAAATGCCACATTTATGGATCCAAACAATCCCCACTGGGGCTGGAACTGGCTAGAGCGATGGATGGCTGCAAGGCCATGGGAGGGACAAAACACTATGTATCACAATGGTCATGCACCTACAAAGAGTGCTGCAAAACACACCATGTCAGTTAGTGAAATCACAAAATTGTACTCTCTCCGTGATCAGAACCATGATGTTAAGAACTCCCCTACAAGCCAAAAAGCAAGCCGTCCTCGCAGCCACATTTCCCCTTCAACACTATCTTCAAAGGCCTCATCAACTAATGGAACAAAGGAAAAGGCTGATTCAAGTCCAAAGGGTGGTTCATGGGGTGGTGATGATGATCCAAAAAGCATGTTTAGCAAAGTCTCAGAAAACAATCGCAGGCATAGCATTGCAGTTCCAGTAAAAGATAATGAGAGCCTTGCAAGCTCATCACCTGCTTTAACAACTCACACAAACACACCGCCACCCACAAAGGTTGTAACAAAAGCCAAGTCCAAAGTGCGTAGTCTATCATCTGGCGTACATAGAAATGGAACACCTGAAAAGGAATCTAACATTCCTTCAAAAAAGAGGCTTTCTTTCTCAGCTTCTCCAGCTGCTTCAAGAAGGCATTCTGTTCCACCTAAGGTTGGAAATTTGGGTTCCAATAAGAATGTTGGTACCATCCCTGAGGAGAAAATGAAAATGAAAAATGGAGGGAGCAGATAG 1488 0.4509 MGRKGGWFSAVKRIFSSDSKKDQKPHHHKSKIACFGHHHPEDLERETEGVAIVAPSLPPRKDKKPRSEAENEQSKQAFSLVLATAVAAGAAVAAAQAAAEVARLTSVPRYPGKTDEEVAAIKIQKTYRGHLARRKLRGLRGLARLKTLVQGQSVQRQAATTLQCMQTLSRLQAQVRARRIKMSEQNQALQRQMQQKREKELQNAVSNQAGEKWDDSSHSKEQIEAKLLNRQVAAMRRERALAYASTHQQTWKNTSKPSNATFMDPNNPHWGWNWLERWMAARPWEGQNTMYHNGHAPTKSAAKHTMSVSEITKLYSLRDQNHDVKNSPTSQKASRPRSHISPSTLSSKASSTNGTKEKADSSPKGGSWGGDDDPKSMFSKVSENNRRHSIAVPVKDNESLASSSPALTTHTNTPPPTKVVTKAKSKVRSLSSGVHRNGTPEKESNIPSKKRLSFSASPAASRRHSVPPKVGNLGSNKNVGTIPEEKMKMKNGGSR* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1998 495 Coils Coil 218 238 - -
Apr8g1998 495 Coils Coil 179 202 - -
Apr8g1998 495 MobiDBLite consensus disorder prediction 15 72 - -
Apr8g1998 495 PANTHER IQ-DOMAIN 5-RELATED 1 489 - -
Apr8g1998 495 MobiDBLite consensus disorder prediction 187 221 - -
Apr8g1998 495 MobiDBLite consensus disorder prediction 316 360 - -
Apr8g1998 495 MobiDBLite consensus disorder prediction 396 441 - -
Apr8g1998 495 Pfam IQ calmodulin-binding motif 119 137 IPR000048 GO:0005515
Apr8g1998 495 SMART iq_5 115 137 IPR000048 GO:0005515
Apr8g1998 495 ProSiteProfiles IQ motif profile. 116 144 IPR000048 GO:0005515
Apr8g1998 495 MobiDBLite consensus disorder prediction 316 495 - -
Apr8g1998 495 Gene3D iswi atpase 113 140 - -
Apr8g1998 495 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1998 Apr-Chr8 30647020 30651248 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1998 1 474 IQD Protein Family AT5G03040 42.975 3.49e-100 307
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1998 - - gmx:100807725 613.224
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g1998 8 30647020 30651248 Apr8g1998 8 30647020 30651248 ECH