Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1990 ATGGGTTGTTGTTGTACCAGATTCTATCTTGTTTTGTTTTTGTCCTTTTGTGTGGGAGTTTCTTTAGCTTCCCCAATTGAAGATCAAAGGAGAGATAGGATTACAGAGTTGCCAGGACAACCAAAGAATGTGGGCTTTGCTCAGTATTCTGGGTATGTGAGTGTGAATGAGGAGAGTGGAACTGGGAGGTCATTGTTCTATTGGTTGGTTGAGGCACCACTGAGTCGTGGACCAAGGTCAAGGCCACTAGTGTTGTGGCTTAATGGTGGCCCTGGATGTTCTTCTATTGCTTATGGTGCATCTGAAGAAATTGGCCCTTTCCACATTAGGCCTGATGGAAAGTCACTTTACTTGAATCCTTATGCTTGGAACAATGTGGCAAATACATTATTCCTTGATTCTCCTGCTGGTGTTGGTTTTTCATATTCTAATAAAACAACGGATCTGTATACATTTGGTGACCAGAAAACAGCTGAGGATACATATACTTTTCTTGTTAAGTGGTTTGAAAGATTTCCTCAGTACAAGCATAGAGAATTTTACATTGCTGGAGAAAGTTATGCAGGCCATTATGTTCCTCAGTTGGCTCAAATTGTATACCAGAAAAACAAGGGAATCAAGAATCCAGATATAAATTTTAAGGGATTTATGGTTGGTAATGCTGTTACTGATGATTATCATGATTATGTTGGTACATTTGAATATTGGTGGACCCACGGTTTGATTTCAGATTCCACGTATAGGATGCTAAAAATTGCCTGTGACTTTGGGTCCTCCCAGCATCCATCAGTGCAATGCATGCAGGCTCTCAGAGTTGCAACTGTGGAGCAGGGAAACATTGATCCATATAGCATATATACACAGCCTTGCAACAATACAGCATCACTCAGACGCGGCTTGAAGGGTCGCTATCCATGGATGTCTCGAGCATACGATCCTTGTACTGAAAGGTATTCTGATTTGTATTTCAATCGTCCAGAAGTTCAGAAGGCATTGCATGCCAATGTAACTGGAATTCCTTACACATGGAAGGCATGCAGTGATATTGTAGGCAACTATTGGACTGATTCTCCACTATCTATGCTTCCAATATATCAAGAACTTATTAATGCTGGCCTACGAATATGGGTATACAGTGGAGACACTGATGCTGTGGTTCCAGTGACTGCCACTCGATATTCTATTGATGCCTTGAAGCTACCTACCCTCATCAATTGGTACCCTTGGTATGATAATGGCAAGGTTGGTGGCTGGAGTCAAGTTTATAAAGGGCTAACATTGGTTACAATAAGAGGAGCTGGACATGAGGTTCCTCTTCATAGGCCCCGCCAAGCATTTATTCTTTTTAGCTCATTCTTGGAGGACAAGTCCTTGCCATCATCAAGTTAA 1389 0.4168 MGCCCTRFYLVLFLSFCVGVSLASPIEDQRRDRITELPGQPKNVGFAQYSGYVSVNEESGTGRSLFYWLVEAPLSRGPRSRPLVLWLNGGPGCSSIAYGASEEIGPFHIRPDGKSLYLNPYAWNNVANTLFLDSPAGVGFSYSNKTTDLYTFGDQKTAEDTYTFLVKWFERFPQYKHREFYIAGESYAGHYVPQLAQIVYQKNKGIKNPDINFKGFMVGNAVTDDYHDYVGTFEYWWTHGLISDSTYRMLKIACDFGSSQHPSVQCMQALRVATVEQGNIDPYSIYTQPCNNTASLRRGLKGRYPWMSRAYDPCTERYSDLYFNRPEVQKALHANVTGIPYTWKACSDIVGNYWTDSPLSMLPIYQELINAGLRIWVYSGDTDAVVPVTATRYSIDALKLPTLINWYPWYDNGKVGGWSQVYKGLTLVTIRGAGHEVPLHRPRQAFILFSSFLEDKSLPSSS* 463
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1990 462 ProSitePatterns Serine carboxypeptidases, serine active site. 182 189 IPR018202 GO:0004185
Apr8g1990 462 Gene3D - 361 454 - -
Apr8g1990 462 Gene3D alpha/beta hydrolase 29 292 IPR029058 -
Apr8g1990 462 Gene3D - 314 350 - -
Apr8g1990 462 SUPERFAMILY alpha/beta-Hydrolases 29 458 IPR029058 -
Apr8g1990 462 PANTHER CARBOXYPEPTIDASE 13 460 - -
Apr8g1990 462 PRINTS Carboxypeptidase C serine protease (S10) family signature 119 131 IPR001563 GO:0004185|GO:0006508
Apr8g1990 462 PRINTS Carboxypeptidase C serine protease (S10) family signature 132 142 IPR001563 GO:0004185|GO:0006508
Apr8g1990 462 PRINTS Carboxypeptidase C serine protease (S10) family signature 168 193 IPR001563 GO:0004185|GO:0006508
Apr8g1990 462 PRINTS Carboxypeptidase C serine protease (S10) family signature 425 438 IPR001563 GO:0004185|GO:0006508
Apr8g1990 462 ProSitePatterns Serine carboxypeptidases, histidine active site. 425 442 IPR033124 GO:0004185
Apr8g1990 462 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 13 460 IPR001563 GO:0004185|GO:0006508
Apr8g1990 462 Pfam Serine carboxypeptidase 38 454 IPR001563 GO:0004185|GO:0006508
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Apr8g1990 Apr-Chr8 30563128 30567047 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1990 324 458 Calmodulin-binding Proteins AT2G22960 30.147 1.37e-13 67.4
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1990 K16297 - gmx:100812000 902.508
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g1990 8 30563128 30567047 Apr8g1990 8 30563128 30567047 ECH