Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1965 ATGGAAATCACAATCACATCAAGAGAAACAATCAAACCATTCTTGCCCACACCAAACGAAAACAAATTCTTTCAACTCTGTCTGTTTGATCAGCTTCAACTTGTCACCTATTTGCCAATGGTTTTGTTTTACCCCAAGAAAGAACCCTTCTTGGAAACCTCTCATATCTGTGCTCAGTTGAAAAGATCACTGTCTGAGACACTAACCATTTTCTACCCTATAGCAGGTAGAAGAAAAAACCACACCTTTATCACTTGTAATGATGAGGGTGCTCTTTACTTGGAAGCCAAGGTAAACCATAACATGATTGAGTTCCTCACACCACCTAAGCTAGAATTTCTGAATAAATTGCTCCCATGTGAGCCAAATAAAATGCACCCAAATGGAGAAGTGTTACCCCAAGTACTAGTACAAGTGAACATGTTCAATTGTGGTGGAATAGCTATAGGTACCTGCAATCTCCACACTCTCCTTGATGGTTGCTCTGGAAGCCTCTTCCAAACTACGTGGGCTTCTATCTGCCGTGGGTCTAGGGAGGAGACTCCATCTCCTGATTTCACCTCAGCTTCTTCTTTCTTTCCACCAATAAATCATTTGAGTTTGCATGACCATGTTGGTCAAAATAATGAGGACTCAAAAGTACAAAAAAATTGCACCACAAGAAGGTTTGTGTTTGATGCACAATCCATCAACACTCTAAGAGCTGATGCAAAAGATAATGAAAGCTCAAATTCTCCTACAAGATATGAAGCACTGGCTGCTTTCATTTGGAAACATATGACACTTGCATACAAGATGGAATGTGGAGATAGCACAAGACCAGCAGTGGCTATCCATATAGTGGACATGAGGAGGAGGATGGGTGAGCCTTTCTCCAAATACACCATAGGAAACATTTTGTGGCCAGTAATGGTATGTTGTGAAACAGTGAATGTTGACACTGATGCTAGATATTTGATTAGTATTGCTAGAGAGAAATTTGGAAAGCTATCAAGGGAATTGTTTTTAAGAGTGAAAAGTGATCCCAATATCTTAGGGAGCAATCAGTGTGTGGATTTGCCTCAAGGCATGGAAACAAGGAGTCCAATTCCAACTGTGTTAACAAGTTGGTGTGGTTTAAATTTCAGTGAGCTAGATTTTGGTTGGGGGAAGCCTTTGTGGGCTGGTGTTAGAGGAGGTGATCAGGAAACTCTGCCCAATGTGGCTGTTATCATGGAAACTGGTGAAGGCATGGAAGCTTGGTTGACAATGGAAATTCAACATATAGCTAAATTGGAGAAGAATGAGGAGTTTCTCAGATTGGCTTTGCCTAATCCTAGTGTTTCACACATATAG 1335 0.4082 MEITITSRETIKPFLPTPNENKFFQLCLFDQLQLVTYLPMVLFYPKKEPFLETSHICAQLKRSLSETLTIFYPIAGRRKNHTFITCNDEGALYLEAKVNHNMIEFLTPPKLEFLNKLLPCEPNKMHPNGEVLPQVLVQVNMFNCGGIAIGTCNLHTLLDGCSGSLFQTTWASICRGSREETPSPDFTSASSFFPPINHLSLHDHVGQNNEDSKVQKNCTTRRFVFDAQSINTLRADAKDNESSNSPTRYEALAAFIWKHMTLAYKMECGDSTRPAVAIHIVDMRRRMGEPFSKYTIGNILWPVMVCCETVNVDTDARYLISIAREKFGKLSRELFLRVKSDPNILGSNQCVDLPQGMETRSPIPTVLTSWCGLNFSELDFGWGKPLWAGVRGGDQETLPNVAVIMETGEGMEAWLTMEIQHIAKLEKNEEFLRLALPNPSVSHI* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1965 444 Pfam Transferase family 1 431 - -
Apr8g1965 444 Gene3D - 205 428 IPR023213 -
Apr8g1965 444 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 5 439 - -
Apr8g1965 444 PANTHER F21J9.9 5 439 - -
Apr8g1965 444 Gene3D - 1 204 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1965 Apr-Chr8 30268025 30269359 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1965 1 427 Monolignol Biosynthesis Gene Families AT5G48930 24.494 4.54e-22 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1965 - K13065 gmx:102668997 756.518