Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1963 ATGATGGAGCTTAGTAGCAATGGCACAAATGCTAATGGCTCCTTCAACCTTTGCAATGGTACCACTGACCCACTCAACTGGGACATGGCTGCGGATGCTTTGAAAGGTAGCCACCTTGATGAGGTGAAGCGCATGGTGGAGGACTATCGTAACCCGTTGGTGACGTTACGTGGCAAGGCCCTCACCGTCTCTCAGGTGGCGGCGGTTGCCACCCAACACGGCGGCGTCACGGTGGAGATCGCCAACGAGACGCGCCACGGCGTTAAGACGAGCAGTGATTGGGTGATGGATAGCATGAATAAAGGGTCTGATAGCAACGGAATTGGCAGAGGGTTTGGTGCAACCTCTCACAGGAGAACCACACAAGGTGGTGCCCTCCAAAACGAGCTTATTAGATTTTTGAATACTGGAATTTTAGGCAATGGCACAGAATCAAGCCACACATTACCTCACTCAGCCACAAGAGCAGCCATGCTGGTTAGGACTAACACCTTACTTCAAGGATATTCAGGCATCAGATTTGAAATCATGGAAGCCATCACCAAGTTTTTGAATTTCAACATTACTCCATGCCTTCCATTGCGTGGCACAATCACTGCATCAGGTGACTTGGTCCCTTTGGCATATGTGGCTGGCCTTTTAATTGGAAGGCCAAATTCCAAGTCTATTGGACCTAATGGCCAAGTTCTCAATGCTGAAGAGGCCTTTCAACTTGCTGGAATTGAGAGTGGTTTCTTTGAGTTGCAACCAAAAGAGGGTTTGGCACTAGTGAATGGCACTGCAGTAGGATCTGGCTTGGCTTCAATGGTTCTTTTTGAGGCAAATTTGCTTGCTGTACTATCTGAAGTGTTGTCTGCAATTTTTGCTGAAGTTATGCAAGGAAAACCAGAATTCACTGACCATTTAACTCATAAATTGAAGCACCATCCTGGCCAAATTGAGGCTGCAGCTATAATGGAACATATTTTAGATGGAAGCTCATACGTTAAGGCTGCACAAAATTTGCATGAGATTGATCCACTTCAGAAGCCTAAACAAGATAGGTATGCTCTCAGAACATCACCACAATGGCTTGGGCCACAGATTGAAGTCATCAGGCATGCAACAAAAATGATTGAGAGGGAGATCAACTCTGTAAATGACAATCCATTGGTTGATATTTCAAGGAATAAGACACTTAATGGAGGAAATTTCCAAGGTACCCCAATTGGTGTTTCCATGGATAATACACGTCTGGCCATTGCTTCAATTGGCAAACTCATGTTTGCTCAATTTTCTGAGCTTGTTAATGACTTTTACAACAATGGGTTGCCATCAACTCTAACAGCTAGTAGAAACCCAAGCTTGGATTATGGCTTCAAAGGGGCAGAAATTGCAATGGCATCCTACTGCTCAGAACTTCAGTACCTTGCCAATCCTGTCACCAATCATGTGCAGAGTGCAGAACAACATAATCAAGATGTCAATTCTTTAGGCTTGATTTCCTCCAGAAAGACAGCTGAAGCAATAGAGATATTGAAACTCATGTCCTCCACCTTCTTAGTTGCATTGTGTCAAGCCATTGATCTCAGACATTTGGAGGAAAACTTGAAGAACACTGTCAAGAATACTGTGAATCATGTGGCTAGGAGAGTTCTCCTAATGGATGTCAATAATGAGCTGCATCTATCCAGGTTCTGTGAGAAGGACTTGCTCAAAGTTGTTGATCGTGAGTATGTGTTTGCTTACATTGATGACCCATGCAGTGCAACTTACCCTCTAATGCAGAAACTGAGGATGGTCCTAGTTGATCATGCATTGAAAAATGCTGACAAAGAGGCAAACTCAAGTACCTCAATTTTCCAAAAGATAGGAGCCTTTGAGGAAGAGCTCAAAACCCTTTTGCCCAAAGAGGTGGAAAGTGTAAGGATCGAAGTTGAGAGTGGAAATCCTGTTTTTCCTAACCGAATCAAGGAATGCCGGTCTTACCCATTATACAAGTTTGTGAGAGAAAGTTTGGGTACAACTTTGTTGACAGGTGAGAAAGCCAAGTCACCTGATGAGGATTGTGATAAGGTATTCACTGCATTGTGTGATGGAAGTTTTATTGAACCCACGTTGGACTGTTTAAAGGATTGGAATGGCACTCCTCTACCTATCTGCTAG 2145 0.4406 MMELSSNGTNANGSFNLCNGTTDPLNWDMAADALKGSHLDEVKRMVEDYRNPLVTLRGKALTVSQVAAVATQHGGVTVEIANETRHGVKTSSDWVMDSMNKGSDSNGIGRGFGATSHRRTTQGGALQNELIRFLNTGILGNGTESSHTLPHSATRAAMLVRTNTLLQGYSGIRFEIMEAITKFLNFNITPCLPLRGTITASGDLVPLAYVAGLLIGRPNSKSIGPNGQVLNAEEAFQLAGIESGFFELQPKEGLALVNGTAVGSGLASMVLFEANLLAVLSEVLSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVKAAQNLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRHATKMIEREINSVNDNPLVDISRNKTLNGGNFQGTPIGVSMDNTRLAIASIGKLMFAQFSELVNDFYNNGLPSTLTASRNPSLDYGFKGAEIAMASYCSELQYLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAIEILKLMSSTFLVALCQAIDLRHLEENLKNTVKNTVNHVARRVLLMDVNNELHLSRFCEKDLLKVVDREYVFAYIDDPCSATYPLMQKLRMVLVDHALKNADKEANSSTSIFQKIGAFEEELKTLLPKEVESVRIEVESGNPVFPNRIKECRSYPLYKFVRESLGTTLLTGEKAKSPDEDCDKVFTALCDGSFIEPTLDCLKDWNGTPLPIC* 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1963 714 Gene3D - 527 648 IPR023144 -
Apr8g1963 714 SUPERFAMILY L-aspartase-like 23 714 IPR008948 GO:0003824
Apr8g1963 714 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 196 212 IPR022313 GO:0016841
Apr8g1963 714 Pfam Aromatic amino acid lyase 61 535 IPR001106 -
Apr8g1963 714 PANTHER HISTIDINE AMMONIA-LYASE 9 714 IPR001106 -
Apr8g1963 714 Gene3D Fumarase/aspartase (Central domain) 261 708 - -
Apr8g1963 714 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 23 704 IPR005922 GO:0005737|GO:0006559|GO:0016841
Apr8g1963 714 PANTHER PHENYLALANINE AMMONIA-LYASE 1-LIKE 9 714 - -
Apr8g1963 714 Gene3D - 15 260 IPR024083 -
Apr8g1963 714 CDD PAL-HAL 59 524 IPR001106 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1963 Apr-Chr8 30236124 30240937 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1963 23 714 Monolignol Biosynthesis Gene Families AT3G53260 78.324 0.0 1160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1963 K10775 - gmx:100818777 1261.13