Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1954 ATGAATAACTCTGTTTCAGACAACAGTTTTATTATTGAGAGTGATGAAGAAGATGAGGAGAAGGATTTGAACAAAGTTGGAGATGATGGTAACGATTCTGATTCTTCCAATTACTCAAACGAAAATCCACCACAGAGAAAACCCAGTTCTTACAACATCTCATGGCCTCAGAGTTACAGGCAATCTATTGATCTATACAGTAGTGTGCCATCACCAAATATTGGATTTTTGGGCACACCCTCATTGTCAAGATTGAGCAGTTCCTTTCTTTCTTCATCTCTAACAAGGAGGCACACTCCTGAAACACTTCCTTCAGTGACAAAGCCTCTTATACAAGCAACAGAAGATGAGCAGCAACAGAGGCGTAGCTCTCATACCTTGCTTCCTCCTCTTCCTTCTAGAAGGTCTTCTTTGATCAAGAAGGATACAAAGGTAGCTCATGAAGTTCCTTCTCGCCAGTGCTCTTTTGGACAGGCTGTGCTTAATGGCATAAATGTTCTTTGTGGTGTAGGAATCCTTTCTACCCCTTATGCTGCCAAGGAAGGTGGATGGCTTGGGCTTTCTATTTTGTTCATTTTTGCAATTATTTCATTTTACACTGGCCTGCTCCTGCGTTCCTGCTTGGACAGTGAACCTGAACTTGAGACATACCCTGACATTGGCCAAGCTGCTTTTGGTACTACTGGACGTATTGCCATTTCAATAGTATTGTACGTGGAATTATATGCTTGTTGCATTGAATATATAATTTTGGAGGGTGACAACTTGTCTTCCTTATTTCCAAATGCACACTTAAATTTGGGTGGAATTGAATTGAATTCACATACTCTATTTGCTGTGATTACTGCCTTGGCTGTTCTTCCTACCGTTTGGCTCCGAGACCTAAGCATTCTCAGTTACATCTCAGCTGGTGGAGTTGTTGCATCAGTTTTAGTGGTTCTCTGCTTGTTATGGGTTGGCGTAGATGAGGTTGGCTTTCATAGCAAAGGGACAACACTCAATCTTGCAACTTTTCCTGTTGCTATTGGTCTTTATGGTTACTGCTACTCTGGACATGCTGTCTTCCCAAACATATATACATCCATGGCAAATCAAAACCATTTCCCTGGAGTGCTCTTAGCATGTTTTGGTATTTGTACCTTATTGTATGCTGGAGCTGCTGTTATGGGATACACAATGTTTGGAGAAGCTACACTCTCTCAGTTCACTCTTAACCTGCCCCAAGAGTTGGTAGCCACCAAGATTGCTGTCTGGACTACGGTGGTTAATCCATTTACCAAGTATGCATTGACTATATCTCCAGTGGCAATGAGTCTGGAGGAGTTGATACCATCAAACCATGCCAAGTCTTATCTATATTCCATCTTCATCAGAACAGGGCTTGTACTTTCTACCCTGGTTATTGGTCTGTCAGTTCCCTTTTTTGGTTTGGTGATGTCATTGATTGGATCATTACTCACAATGCTTGTTACTTTGATACTACCATGTGCTTGTTTCCTAAGAATCTTGCGGGGTAAAGTGACACGATTACAGGCAACTCTTTGCATTATAATTATCGCAGTAGGTGTTGTATGTTCTTCTATTGGAACATACTCAGCCCTTGTTGAGATTGTTAAGAGTTTGAAGGGATGA 1632 0.4142 MNNSVSDNSFIIESDEEDEEKDLNKVGDDGNDSDSSNYSNENPPQRKPSSYNISWPQSYRQSIDLYSSVPSPNIGFLGTPSLSRLSSSFLSSSLTRRHTPETLPSVTKPLIQATEDEQQQRRSSHTLLPPLPSRRSSLIKKDTKVAHEVPSRQCSFGQAVLNGINVLCGVGILSTPYAAKEGGWLGLSILFIFAIISFYTGLLLRSCLDSEPELETYPDIGQAAFGTTGRIAISIVLYVELYACCIEYIILEGDNLSSLFPNAHLNLGGIELNSHTLFAVITALAVLPTVWLRDLSILSYISAGGVVASVLVVLCLLWVGVDEVGFHSKGTTLNLATFPVAIGLYGYCYSGHAVFPNIYTSMANQNHFPGVLLACFGICTLLYAGAAVMGYTMFGEATLSQFTLNLPQELVATKIAVWTTVVNPFTKYALTISPVAMSLEELIPSNHAKSYLYSIFIRTGLVLSTLVIGLSVPFFGLVMSLIGSLLTMLVTLILPCACFLRILRGKVTRLQATLCIIIIAVGVVCSSIGTYSALVEIVKSLKG* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1954 543 MobiDBLite consensus disorder prediction 93 134 - -
Apr8g1954 543 Pfam Transmembrane amino acid transporter protein 153 532 IPR013057 -
Apr8g1954 543 PANTHER OS05G0424000 PROTEIN-RELATED 26 540 - -
Apr8g1954 543 MobiDBLite consensus disorder prediction 1 53 - -
Apr8g1954 543 MobiDBLite consensus disorder prediction 93 131 - -
Apr8g1954 543 MobiDBLite consensus disorder prediction 30 53 - -
Apr8g1954 543 PANTHER AMINO ACID TRANSPORTER AVT1B 26 540 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1954 Apr-Chr8 30157280 30166629 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1954 1 476 Amino Acid or Auxin Permease AAAP Family AT2G39130 72.727 0.0 713
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1954 K15015 - gmx:100775840 917.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g1954 8 30157280 30166629 Apr8g0943 8 11127458 11135311 ECH
Apr8g1954 8 30157280 30166629 Apr8g1954 8 30157280 30166629 ECH