Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1930 ATGACTGAAGAAAGTGCTGGGAACACACTTGCGACCACTATTGCCCCTCTAAACTGGTGGTATCTCCAGGCAAATTCTCTTTCTTCCTGGAACGATACTAATAACGCATGGAACAACCAACCAAACCCTAATTCTTCCTCTTCTGGTGAGGAGGATATATCTGTTTCCACATCTTTCACTAATGCTTCCAACCATTCAAGCCTCACTGTTGAATCCTCTCGTAGACTCGTTGATCCACCTGCACCTTCCTCCAACGAGTTGATGGGAGAACATGCTTCAGATAATCAACTTTGGAGTCATGTTCTATCAGGTGTTGGATCAAATGGCGAGTTGCACAACAGCCAAGAAATTGGAGAGAACTTTCTGGATGCACTATCATCAAAAAACATTACAAACACTATGTTTCAACCAGCCTGTGACTACTTGAAGAAACTTGACACCAGTTGGGAATATAGTGGTTCAGCTTCATTCAATAGCTTTGAGAAGAATTTAAATGGGTTTAGCGAGGCGATGATTGAGAATAATGAAAGGTTGACCAAGTTATCTAATCTTGTAAGCACTTGGTCTATTGCCCCACCAGACCCAGAAGTTAGTGGCCACTTTGATCCACAAACAAACAACATGTCTATGAGTTCTTCCATGGATCACTTCCCACAATCTGATCACTTCAAGCAGCCTTTTGGAGACTCCACATCATGTTCTCTTGGAGGAGCAAGTAGAAATTCTGGAATGCTTCCTTGCTATGATCATGACATGAAGGTCAAGCAAGAGTATCATGCAAGTGAAGTGCCAGGAGCAGTATTTGGAAAATCATTAAATACAAATGGATATCAAAATGGATTTAATAGTCCTTCAGTAGGAGAGAGTAGCAAATTCTACCATGGGTTGCCCAATCTTTCTTCATGCACAAGAAATTTCTCAGATGTCATATCCTTCAATAGTCGACTAGGAAGGCCAGTTATTGGAATCCATGCACAGAAGCCTAGAATGAAGTACTTAAACTTAACTGAATCAAAGAAGCAGGGTCTTCAGACACCGTCACAGATAAGAACTATTAATGGAAGAGGAGAGGGGACAACACGTGAAGTAAAGAAGAAAAGATCTGAAGAATCTTCTGAAGCCATCTTGAAAAAGCCTAAGCAAGATGCATCAACAGCTTCTTCAAAGGTGCAGGCCCCCAAAGTCAAGCTAGGGGACAAGATCACAGCCCTTCAACAAATTGTGTCTCCATTTGGAAAGACGGATACAGCATCTGTGCTGTTTGAAGCAATAGGATACATAAAGTTTCTTCAAGAACAAGTCCAGCTACTGAGCAACCCTTACTTGAAGACTAATGCTCACAAGGAACCATGGGGAAGCTTGGATAGAAAAGACAAGGAGGACACAAAGCTAGACCTTCGGAGTAGAGGTCTTTGTTTGGTTCCTACTTCATGTACTCCTCTAGTTTACAGAGAGAGCAGTGGACCAGATTACTGGACACCAGCGTATAGAGGATGTTTGTATAGGTGA 1509 0.4208 MTEESAGNTLATTIAPLNWWYLQANSLSSWNDTNNAWNNQPNPNSSSSGEEDISVSTSFTNASNHSSLTVESSRRLVDPPAPSSNELMGEHASDNQLWSHVLSGVGSNGELHNSQEIGENFLDALSSKNITNTMFQPACDYLKKLDTSWEYSGSASFNSFEKNLNGFSEAMIENNERLTKLSNLVSTWSIAPPDPEVSGHFDPQTNNMSMSSSMDHFPQSDHFKQPFGDSTSCSLGGASRNSGMLPCYDHDMKVKQEYHASEVPGAVFGKSLNTNGYQNGFNSPSVGESSKFYHGLPNLSSCTRNFSDVISFNSRLGRPVIGIHAQKPRMKYLNLTESKKQGLQTPSQIRTINGRGEGTTREVKKKRSEESSEAILKKPKQDASTASSKVQAPKVKLGDKITALQQIVSPFGKTDTASVLFEAIGYIKFLQEQVQLLSNPYLKTNAHKEPWGSLDRKDKEDTKLDLRSRGLCLVPTSCTPLVYRESSGPDYWTPAYRGCLYR* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1930 502 MobiDBLite consensus disorder prediction 33 73 - -
Apr8g1930 502 MobiDBLite consensus disorder prediction 33 89 - -
Apr8g1930 502 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 381 430 IPR011598 GO:0046983
Apr8g1930 502 PANTHER TRANSCRIPTION FACTOR BHLH111 31 488 - -
Apr8g1930 502 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 31 488 - -
Apr8g1930 502 MobiDBLite consensus disorder prediction 338 355 - -
Apr8g1930 502 MobiDBLite consensus disorder prediction 357 377 - -
Apr8g1930 502 Gene3D - 393 449 IPR036638 GO:0046983
Apr8g1930 502 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 396 447 IPR036638 GO:0046983
Apr8g1930 502 MobiDBLite consensus disorder prediction 338 391 - -
Apr8g1930 502 CDD bHLH_AtbHLH_like 396 438 IPR045239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1930 Apr-Chr8 29876886 29879874 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1930 23 502 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G31050 34.600 2.67e-52 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1930 - - aprc:113873522 983.4