Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1925 ATGATGCCCCCTGAGCAAGAAACCACTATTGCACCAAACATTCCAGCCATCTCAACCCGCCCCGAGAACACCCTCGAACCGGAGGGTTCCACCACTAACAAAATCAAACCCAGTAATTTGGATGATGATGGCATTAATATTCCTGCACAGCATCACCCTCAGCCAACAACCGCACCAAGATTTTCCATTCTTCACCAATCCTTGCGTCCTGTTACCCTCAAGTTTGAAGACGTATCTTACAGCATAACCTTCCAAAGCCAAAAGAAGGGTTGTGTTTTGCGGAAAGAAGCGAAGCTGACACGAAAAGTACTCACCGGCGTGACCGGAACGGCGAACCCCGGCGAGCTAACAGCAATGCTGGGCCCCTCAGGGAGCGGCAAGACCACCCTACTAACCGCCCTAGCCGGAAGACTCGCCGGAAAAGTCTCCGGCACAATAACATACAATGGGCATTCAGACCCGACCTTCATGAAGCGAAGAATCGGGTTCGTGTCACAAGACGACGTTCTGTACCCTCACCTCACGGTTCTTGAAACTCTTACCTACGCAGCTTTGTTGAGACTTCCAAAGAGTTTAAGCAAAGAAGAGAAAAAGGAGCATGCAGAGATGGTGATCATGGAGCTTGGGTTAACACGGTGTCGTAATAGCCCCGTTGGAGGGTGCATGGCTTTGTTCAGAGGCATTTCGGGTGGGGAAAGAAAACGGGTCAGTATCGGGCAAGAGATGTTGATTAACCCGAGTTTGTTGTTTGTGGATGAGCCCACGTCGGGTTTGGACTCAACCACGGCCCAACTCATCGTGTCAGTGCTCCGCGGCCTCGCTCGGGCCGGCCGGACCGTCGTCACCACCATTCACCAGCCTTCAAGTCGGTTGTATAGGATGTTTGATAAGGTGGTTGTGTTATCCGACGGGTACCCGATTTATAGTGGGCATTCGGGTCGGGTCATGGACTATCTCGGATCCGTTGGATATGTGCCAGCTTTCAATTTCATGAACCCGGCTGATTTCCTACTTGATCTTGCTAATGGCATAGTTGCTGATGTCAAACATGATGATCATATAGATCATCATGAGGATCAAGCTTCAGTCAAACAGTCCCTAATTTCATCCTTTAAGAAGAACTTATATCCTGCTCTTAAAGAAGAGATTCAGCAAAGTCACAATGACCCGGTGACTCTTGCATCAGGAACACCTAGACGTTCTGATAACCGATGGACCACTAACTGGTGGGAGCAATTCAAGGTACTTCTTAAGAGGGGTTTACAAGAGAGGAGGCATGAATCTTTCTCTGGCTTAAGGATTTTCCAAGTCTTGTCTGTTTCCATTCTCTCCGGACTCCTTTGGTGGCATTCTGATCCTTCACATGTACAAGATCAGGTAGGACTCCTTTTCTTCTTCTCCATCTTCTGGGGATTCTTCCCTCTCTTCAATGCCATCTTTGCGTTCCCTTTGGAGAGGCCAATGCTAATAAAAGAAAGATCATCAGGCATGTACCATCTCTCCTCATACTATGTTGCTAGGATGGTTGGAGACTTACCAATGGAGCTTGTGCTTCCTACTATCTTTGTAACTATCACATACTGGATGGGTGGTCTTAAGCCTTCATTGGTTACATTTTTGTTGACCCTCTTGATCATGCTTTTTAATGTTCTAGTCTCACAAGGCATAGGCCTAGCACTTGGTGCAATTCTCATGGATGTGAAGCAGGCCACAACTCTAGCATCAGTGACCATGCTGGTGTTTCTGTTAGCTGGTGGTTACTACATTCAGCAAATTCCCTCCTTTATAGCTTGGTTAAAGTACATTTCTTTTAGTCACTACTGCTATAAGCTACTAGTAGGAGTCCAGTTTTCAGTAAATGAGGTGTATGAGTGTGGATCAGGGTTGCATTGTAGGATAAGAGATTTTCCTGCCATAAAGTGTCTTGGGCTTGATAATAATATGTGGGGAGATGTGGCTGCATTGACTGTAATGTTGATTGGATACAGAGTTGTGGCATATCTAGCTTTGAGGATGGGGCAACCTCACTGA 2031 0.4697 MMPPEQETTIAPNIPAISTRPENTLEPEGSTTNKIKPSNLDDDGINIPAQHHPQPTTAPRFSILHQSLRPVTLKFEDVSYSITFQSQKKGCVLRKEAKLTRKVLTGVTGTANPGELTAMLGPSGSGKTTLLTALAGRLAGKVSGTITYNGHSDPTFMKRRIGFVSQDDVLYPHLTVLETLTYAALLRLPKSLSKEEKKEHAEMVIMELGLTRCRNSPVGGCMALFRGISGGERKRVSIGQEMLINPSLLFVDEPTSGLDSTTAQLIVSVLRGLARAGRTVVTTIHQPSSRLYRMFDKVVVLSDGYPIYSGHSGRVMDYLGSVGYVPAFNFMNPADFLLDLANGIVADVKHDDHIDHHEDQASVKQSLISSFKKNLYPALKEEIQQSHNDPVTLASGTPRRSDNRWTTNWWEQFKVLLKRGLQERRHESFSGLRIFQVLSVSILSGLLWWHSDPSHVQDQVGLLFFFSIFWGFFPLFNAIFAFPLERPMLIKERSSGMYHLSSYYVARMVGDLPMELVLPTIFVTITYWMGGLKPSLVTFLLTLLIMLFNVLVSQGIGLALGAILMDVKQATTLASVTMLVFLLAGGYYIQQIPSFIAWLKYISFSHYCYKLLVGVQFSVNEVYECGSGLHCRIRDFPAIKCLGLDNNMWGDVAALTVMLIGYRVVAYLALRMGQPH* 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1925 676 SMART AAA_5 113 306 IPR003593 -
Apr8g1925 676 MobiDBLite consensus disorder prediction 1 57 - -
Apr8g1925 676 ProSitePatterns ABC transporters family signature. 228 242 IPR017871 GO:0005524
Apr8g1925 676 Gene3D - 73 322 IPR027417 -
Apr8g1925 676 Pfam ABC-2 type transporter 285 349 IPR043926 GO:0140359
Apr8g1925 676 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 73 328 IPR003439 GO:0005524
Apr8g1925 676 MobiDBLite consensus disorder prediction 11 39 - -
Apr8g1925 676 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 101 321 IPR027417 -
Apr8g1925 676 PANTHER ABC TRANSPORTER G FAMILY MEMBER 21 41 673 - -
Apr8g1925 676 CDD ABCG_EPDR 70 310 - -
Apr8g1925 676 Pfam ABC transporter 105 256 IPR003439 GO:0005524
Apr8g1925 676 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 41 673 - -
Apr8g1925 676 Pfam ABC-2 type transporter 411 617 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1925 Apr-Chr8 29835928 29839920 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1925 102 304 Calmodulin-binding Proteins AT2G36910 30.806 2.29e-13 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1925 K05681 - gmx:100783696 1161.75