Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1904 ATGGACTTCACAATTTGTACATTGTTCCTTCTGTTGGCATGTGTCACCATTGGTTCATTCCTTGCAAGAACAACCACAAAACCAAACCACAAACTTCCACCAGGCCCTTCACGCCTTCCCATCATAGGAAACCTCCTTGAACTTGGGCAAAAGCCACACCAATCTTTGGCCAAGCTTGCAAAGATTCATGGTTCTATGATGAGCCTCAAGCTAGGTAGAGTAACCACTATAGTAATTTCTTCTGCTGAGATGGCCAAAGAAGTGCTCCTAACACATGACCAATCCTTGTCAAACCGTCCCATTCCTCAATCAGTGTCAGTTCTCAACCATGAACACTATAGCCTTGCCTTCTTACCCGTTTCACCATTGTGGCGAGAGTTGAGAAAAATATGCAATGGCCAACTATTTGCACACAAGACCCTTGATGAAAGCCAAGAAGTTAGACGCAAAAAAGTGCAACAACTCCTCAATGATGTGTACAAAAGTAGCCAAGTTGGTGAAGCAGTGGATATTGGAAGAGAAGCATTCAAGACCACCATAAATTTGTTATCAAACACCATTTTCTCTGAGGACTTGGTTTTGTCTAAAGGGAAAGTGGGAGAGTTCAAGGACTTGGTGACCAATATCACAAAACTTGTTGGATCACCAAACATAGCAGATTTTTTCCCTGTGCTGAAGATGGTTGATCCGCAGGGTGTGAAAAGACAACAAGCTAAGAATGTTGCCAAGGTGTTGGACATCTTCGACTGCTTGATTAGGCAACGGTTGAAGTTGAGGGAAAGCACAGGTTCTGACACGCACAATGACATGTTGGAAGCCTTGCTCAACATTTCTAAGGACAACAAGATGATTGACAAAACAATGATTGAACATTTGGCACATGATCTGTTTGTTGCGGGAACAGATACAACAACTTCAACTCTTGAATGGGCAATGACTGAGTTAGTACTCAACCCAGAGATCATGTCAAAGGCAAAAAAAGAGTTGGAAGAAGAAATAGGCAAAGGTAAGCCTGTAGAAGAATCAGATATTGCTAAACTCCCTTACTTGCAAGCAATCATAAAAGAGACCTTGCGCTTGCACCCTCCAGTTCCTTTCTTACTTCCTCGAAAGGCAGAAAGAGATGTAGACATATGTGGCTTCACCATCCCAAAGGATGCACAAGTGCTAGTTAATGTGTGGACTATTGGTAGGGATCCAACCTTATGGGTGAATCCAACTTTGTTCTCTCCAGAGAGGTTTTTGGGCTCAGATATTGATATCAAAGGTCGAAACTTTGAGCTTGCACCATTTGGTGCTGGAAGGCGCATATGCCCTGGCATGATGTTGGCTATTAGAATGTTGCTTTTGATATTGGGTTCACTAATCAATTCCTTTGATTGGAAACTTGAAGATGGCATTAAACCACAAGATGTTGACATGGGCGAAAAATTTGGAATTACCTTACAAAAGGCTCAACCACTTCGAGTTGTTCCAGTTGACATATAA 1488 0.4227 MDFTICTLFLLLACVTIGSFLARTTTKPNHKLPPGPSRLPIIGNLLELGQKPHQSLAKLAKIHGSMMSLKLGRVTTIVISSAEMAKEVLLTHDQSLSNRPIPQSVSVLNHEHYSLAFLPVSPLWRELRKICNGQLFAHKTLDESQEVRRKKVQQLLNDVYKSSQVGEAVDIGREAFKTTINLLSNTIFSEDLVLSKGKVGEFKDLVTNITKLVGSPNIADFFPVLKMVDPQGVKRQQAKNVAKVLDIFDCLIRQRLKLRESTGSDTHNDMLEALLNISKDNKMIDKTMIEHLAHDLFVAGTDTTTSTLEWAMTELVLNPEIMSKAKKELEEEIGKGKPVEESDIAKLPYLQAIIKETLRLHPPVPFLLPRKAERDVDICGFTIPKDAQVLVNVWTIGRDPTLWVNPTLFSPERFLGSDIDIKGRNFELAPFGAGRRICPGMMLAIRMLLLILGSLINSFDWKLEDGIKPQDVDMGEKFGITLQKAQPLRVVPVDI* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1904 495 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 494 - -
Apr8g1904 495 Gene3D Cytochrome P450 22 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g1904 495 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 431 440 IPR017972 GO:0005506|GO:0016705
Apr8g1904 495 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g1904 495 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g1904 495 PRINTS E-class P450 group I signature 288 305 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g1904 495 PRINTS E-class P450 group I signature 308 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g1904 495 PRINTS E-class P450 group I signature 351 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g1904 495 PRINTS E-class P450 group I signature 392 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g1904 495 PRINTS E-class P450 group I signature 428 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g1904 495 PRINTS E-class P450 group I signature 438 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g1904 495 Pfam Cytochrome P450 33 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g1904 495 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 494 - -
Apr8g1904 495 PRINTS P450 superfamily signature 299 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g1904 495 PRINTS P450 superfamily signature 352 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g1904 495 PRINTS P450 superfamily signature 429 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g1904 495 PRINTS P450 superfamily signature 438 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g1904 495 SUPERFAMILY Cytochrome P450 33 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1904 Apr-Chr8 29559648 29561680 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1904 1 493 Cytochrome P450 AT2G45550 45.545 2.74e-159 460
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1904 - K23810 gmx:100798291 856.284