Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1900 ATGCACTCCTCCGCCGAGGAAGATTCCGACAAATCCACCACCGTGACCACCACCGCCACAGAATGGACGTTCTCCACCAAGTCACACGCACCCTCCTCCGTCGACCCATGCTGGGACGCCATACAGCGCGGCGGCGCCACCCTGGGACTCGGAGACCTCCGGTTCGTGCAGTGCTTGGGAAGCGGCGACATAGGAAGTGTGTATCTGGTGGAATTGAAGGGTTCTAACGGGTTACTCTTCGCAGCGAAGGTGATGGACAAGAAGGAGCTCGTGGCTAGGAACAAAGACACGAGGGCCAGGGTTGAGAGGGAGATACTGCACGTGCTCGATCATCCTTTCTTGCCAACGCTTTATGCATCTTTTGATTCTCCACGGTGGTCTTGCCTACTTACCGAGTTTTGCCCCGGCAGCGACCTCCACGTCCTCCGCCAGCGCCAGCCCGAAAAACGGTTCCACGAGGCCGCAGTTAGGTTCTATGCATCTGAGGTGGTGGTTGCCTTGGAATACCTACACATGATGGGGATAATATACCGCGATTTGAAGCCTGAAAACGTGCTCATAAGATCGGACGGTCATATAATGCTCACAGATTTTGATCTCTCACTAAAAGGCGATGACACGTCATCAACGGCCCAGATTGTCTTTGATCAAGATCCACCCACCAACACTTGTTCCAACGAACATTCCAAAAACCAATGTGCACCCGCCATGTCATCATGCATGTTGCCCAATTGCATCGTGCCATCTGTCCCATGCTTCATCCCCAAACGCAGCCGTAAAAAGAGGTCATCACGTTGTGGGTCCCTCGAGATCATAGCCGAGCCAATAGAAATTCGATCCATGTCGTTTGTTGGGACCCACGAGTACTTGGCACCGGAGGTAATTTCCGGGGAAGGTCACGGTAACGTCGTTGAGTCCAATTGA 924 0.5346 MHSSAEEDSDKSTTVTTTATEWTFSTKSHAPSSVDPCWDAIQRGGATLGLGDLRFVQCLGSGDIGSVYLVELKGSNGLLFAAKVMDKKELVARNKDTRARVEREILHVLDHPFLPTLYASFDSPRWSCLLTEFCPGSDLHVLRQRQPEKRFHEAAVRFYASEVVVALEYLHMMGIIYRDLKPENVLIRSDGHIMLTDFDLSLKGDDTSSTAQIVFDQDPPTNTCSNEHSKNQCAPAMSSCMLPNCIVPSVPCFIPKRSRKKRSSRCGSLEIIAEPIEIRSMSFVGTHEYLAPEVISGEGHGNVVESN* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1900 307 Gene3D Phosphorylase Kinase; domain 1 55 137 - -
Apr8g1900 307 SMART serkin_6 53 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g1900 307 ProSitePatterns Serine/Threonine protein kinases active-site signature. 175 187 IPR008271 GO:0004672|GO:0006468
Apr8g1900 307 PANTHER PROTEIN KINASE G11A-LIKE 6 305 - -
Apr8g1900 307 SUPERFAMILY Protein kinase-like (PK-like) 38 301 IPR011009 -
Apr8g1900 307 Pfam Protein kinase domain 56 214 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g1900 307 Gene3D Transferase(Phosphotransferase) domain 1 138 304 - -
Apr8g1900 307 ProSiteProfiles Protein kinase domain profile. 53 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g1900 307 PANTHER FLIPPASE KINASE 1-RELATED 6 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1900 Apr-Chr8 29510011 29512583 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1900 59 305 AGC Kinase Gene Family AT3G44610 62.835 2.98e-116 341
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Apr8g1900 Pkinase 4.9e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1900 K08286 - aprc:113871752 602.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g1900 8 29510011 29512583 Apr8g1900 8 29510011 29512583 ECH