Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1899 ATGGAGGAAGGTTTGGATGGAGAAGTATCAAGGTCGCTGAGCAGCTTGAGGATGAGCATTGGATCTTGGAGCAGGAGGAGTTGGGTATCAGCAAGTGTTCCTGAACTATGGAGTGGACATGGTGGTGATGTTTTTGAGAGGAGTAAGAAAGAAGTTGATGAAGAAGAGCTCAAGTGGGCAGCTATACAGAGGCTTCCAACATTTGAGAGGCTAAGGAAAAGCATAGTCAAAAGAGTCTTAGAAGAGAGTGGAAGGTTCAACTATGAGGAGGTTGATTTATCCAAGCTTGACATGCAGGAGAAGAAGAAACTCCTTGATGGTATATTAAGGACTGTTGAAGATGACAATGAGAGGTTTCTCCATAAGATGAGGGAGAGAATTAATAGGGTGGCCATAGAGATTCCAAAGGTTGAAGTCCGGTTTGAACATTTGTTTGTGGAAGGGGATGCATTTAATGGAACCAGAGCACTGCCAACATTAGTGAATTCCACCATGAATGCCATGGAGAGAGTTCTTGGATCAGTCAATCTTCTCCCCTCAAAGAAAAGTGTTGTCAAGATCCTCCAAGATGTTAGTGGCATTGTCAGGCCAGCAAGATTGACCTTGCTTTTGGGGCCTCCAAGATCAGGAAAAACTACACTGCTACAGGCTCTTGCTGGCAAACTGGACAGGGATTTAAGGGTATCAGGAAGAATCACTTACTGTGGTCATGAGTTATCAGAGTTTGTTCCTCAAAGAACATGTGCTTATATTAGTCAACATAATCTTCATCATGGAGAGATGACAGTGAGAGAGACACTGGACTTTTCTGGACGCTGCTTAGGAGTTGGAACAAGGCATGATCTGCTAGTGGAATTGACAAGGCGAGAAAAGCAAGCAGGAATCAAACCAGATCCAGAGATAGATGCTTTCATGAAAGCCACAGCAATGGAAGGTCAAGAAACAAGTCTTATTACAGATTATGTTCTTAAGATTCTTGGATTGGAAATATGTGCTGATACTTTGGTAGGAGATGAGATGAGAAGGGGAATATCTGGTGGAGAGAAAAAGCGGTTAACAACTGGTGAGATGTTGGTAGGACCTGCAAAAGTATTCTTAATGGATGAGATTTCAACTGGTTTGGATAGTTCCACCACATTTCAGATTGTTAAGTTCTTGAGGCAGCTAGTGCATATCATGGATGTTACAATGATAATCTCTCTTTTACAACCTGCACCAGAAACATTTAACCTTTTTGATGACATAATCTTACTTTCAGAAGGTCACATTGTCTACCAAGGTCCAAGGGAGAATGCCCTCAATTTTTTTGAGAGTGTTGGCTTCAGATGCCCTGAAAGGAAAGGAGTTGCAGATTTCTTACAAGAGGTTACTTCCAGAAAGGACCAAGAACAGTACTGGTTCTCAAGGAACAAACCTTACCGTTATATCAGTGTGCCTGAGTTTGTAGCTCACTTCAACAATTCTGGCATTGGCCAGCAACTTTCCCAAGAGCTTCAGGTTCCCTATGATCGCACTAAAACTCATCCTGCTGCATTGGTTAAAGATAAATATGGGATCTCAAAACTAGAACTCTTTAAGTCATGCTTTGCAAGAGAGTGGCTACTGTTGAAGCGCAGTGCTTTTATATATATCTTTAAGACTACTCAGATTATGATAATGTCTTTGATTGCTATGACAGTGTTTCTTAGATCAGAAATGGGAAGTGGCCAACTTAGTGATGGGAGAAAATATTATGGTGCACTATTCTTCAGTCTCAATAATATAATGTTCAATGGAATGGCTGAGCTTGCGTTGACTATTTTTAGACTTCCTGTTTTCTTCAAGCAGAGAGATTTGTTATTTTATCCAGCATGGGCTTTTGCACTGCCCATATGGATCTTTCGAATCCCTCTCTCTTTTGTGGAGTCGGGATTATGGGTTGTCCTTACTTATTACACTATAGGCTTTGCTCCAGCTGCAAGTAGATTTTTTCGCCAGTTACTAGCATTCTTCTGCGTTCATCAAATGGGTTTATCTCTGTTCCGATTCATTGCTGTTCTTGGAAGAACACTAGTTGTGGCTAATACACTAGCTACATTCGTAATACTAATTATTTTTGTACTTGGTGGGTTCATTATTGCCAGAGATAACATTGAACCTTGGATGATATGGGGCTATTATGCTTCTCCTTTGATGTATGGTCAGAATGCCGTTGTCATCAATGAATTCCTTGACAAGAGATGGAGTGCTCCCAATATGGACCCAAGAGTTCCTGAGCCCACAGTTGGAAAGGCTCTTCTCAGGGCTAGAAGCATGTTTACAGAAGATTATTGGTACTGGATTTGTATTGGTGCTCTCCTAGGATTTTCTCTGCTTTTCAACACTTGTTTTATTGTTGCACTGTCATTTCTGAATCCATTTGGAGATTCTAAACCTATAATTCTAGAGGAGGAAAACGAGAAGAAGGGAACTACAGAAGAGAAAAAAAACACCCCAGGGAGTTCAATTTCTAAAGCAGACACTGGAGCAACCAAGAAGGGAATGGTGTTACCCTTTAGGCCTCTATCACTTGCTTTTGATCACGTGAATTACTACGTCAATATGCCAACTGAAATGAAAAAACAAGGATTTGAAGACAGTCGCCTTCAACTACTAAGAGACTGCAGTGGTGCTTTCAGGCCTGGAGTACTAACAGCACTAGTAGGTGTAACTGGTGCTGGAAAAACGACATTAATGGATGTTCTTGCTGGAAGAAAGACCGGTGGCTATGTTGAAGGAAGCATCAGCATATCTGGTTACCCAAAGAACCAAGCAACTTTTGCTCGGATTACTGGATATTGTGAACAAAATGATATCCATTCTCCAAATATCACTGTCTATGAATCTGTTGTGTTTTCTTCTTGGCTGCGTCTTGGTAAAGAGGTCAAGAGAGAAACACGGAAGATGTTTGTTGAGGAAGTAATGAACCTTGTTGAGCTACATCCAGTGAGAAATTTTCTAGTAGGCCTTCCTGGCATAGATGGTTTATCAACTGAACAAAGAAAGCGACTCACCATTGCAGTAGAATTGGTTGCCAATCCTTCTATCATCTTTATGGATGAGCCGACCTCAGGCCTTGATGCTAGAGCTGCAGCAATTGTTATGCGTACTGTCAGAAATACGGCAGATACAGGGAGAACTATTGTCTGCACAATTCATCAACCTAGCATTGACATATTTGAAGCTTTTGATGAGCTTCTTTTGATGAAGAGAGGAGGACAAATCATATATAGTGGCCCCCTTGGTCAACAATCTCAGAAGCTTATAGAGTACTTTGAGGCTATTCCAGGAGTTCCAAGAATCAAACATGGATACAATCCTGCCACATGGATTTTGGAGATTAGTTCTCCTGCAGTCGAGTCTCGGCTTAAGGTAGACTTTGCAGAATTGTACAATAAGTCAGAATTGTACCAGAGGAATCAAGAGCTTATAAAAGAGCTAAGCATGCCATTAGAGGGAACAAAGGACATTAATTTCCCTACTAAATATTCGCTGTCCTTTATTACTCAATGTAAAGCTTGCCTATGGAAACAGCATTTGTCCTACTGGAGGAACCCACAGTATAATGCTGTCCGTTACTTCATGTCAATATTTGTAGGTGTTATTTTTGGACTCATTTTCTGGAAAAAAGGAGATAAAACAGATAAGGAGCAAGATCTTATGAATCTAATGGGAGCTACTTTTTCTGCTATTTTCTTTCTTGGAGCCACCAACACTGCCTCTGTTCAACCTGTAATTGCAATAGAAAGAACGGTCTTCTACCGTGAAAGAGCAGCTGGAATGTACTCAGCTCTTCCTTATGCAATTGCTCAGGTAGCAATAGAATGTATTTATGTTGCAATCCAGTCATTGACCTTTACCCTTATCCTTTACTCAATGATGGGGTTCCCTTGGCAAGCTGACAAGTTCCTCTGGTTCTACTACTTCATGTTCATGTCATTTGTCACCTTCACACTTTATGGCATGATGACTATGGCTCTGACACCAAACCCACAAATTGCTGCAATTATTATGTCCTTCTTTCTAGTTTTCTGGAATATATTCTCGGGCTTCATTATCCCAAAATCGCAAATTCCTATATGGTGGAGGTGGTATTACTGGGCGTGTCCAACTGCTTGGACTATGTATGGCCTTCTGACATCCCAGGTGGGTGACAAAGATACTCCAGTTGAGGTACCTGGATCTGGATCAATGTCAGTAAAAGCATACCTTGAGAAACAGATGGGCTATGAATATGGCTTCCTAGGAGTTGTTGCTGTGGCTCATGTTGCTTTTGTTGCACTGTTTCTTTTTGTTTTTGCATACGGTATCAAGATCTTTAATTTCCAGAAAAGATAA 4356 0.4105 MEEGLDGEVSRSLSSLRMSIGSWSRRSWVSASVPELWSGHGGDVFERSKKEVDEEELKWAAIQRLPTFERLRKSIVKRVLEESGRFNYEEVDLSKLDMQEKKKLLDGILRTVEDDNERFLHKMRERINRVAIEIPKVEVRFEHLFVEGDAFNGTRALPTLVNSTMNAMERVLGSVNLLPSKKSVVKILQDVSGIVRPARLTLLLGPPRSGKTTLLQALAGKLDRDLRVSGRITYCGHELSEFVPQRTCAYISQHNLHHGEMTVRETLDFSGRCLGVGTRHDLLVELTRREKQAGIKPDPEIDAFMKATAMEGQETSLITDYVLKILGLEICADTLVGDEMRRGISGGEKKRLTTGEMLVGPAKVFLMDEISTGLDSSTTFQIVKFLRQLVHIMDVTMIISLLQPAPETFNLFDDIILLSEGHIVYQGPRENALNFFESVGFRCPERKGVADFLQEVTSRKDQEQYWFSRNKPYRYISVPEFVAHFNNSGIGQQLSQELQVPYDRTKTHPAALVKDKYGISKLELFKSCFAREWLLLKRSAFIYIFKTTQIMIMSLIAMTVFLRSEMGSGQLSDGRKYYGALFFSLNNIMFNGMAELALTIFRLPVFFKQRDLLFYPAWAFALPIWIFRIPLSFVESGLWVVLTYYTIGFAPAASRFFRQLLAFFCVHQMGLSLFRFIAVLGRTLVVANTLATFVILIIFVLGGFIIARDNIEPWMIWGYYASPLMYGQNAVVINEFLDKRWSAPNMDPRVPEPTVGKALLRARSMFTEDYWYWICIGALLGFSLLFNTCFIVALSFLNPFGDSKPIILEEENEKKGTTEEKKNTPGSSISKADTGATKKGMVLPFRPLSLAFDHVNYYVNMPTEMKKQGFEDSRLQLLRDCSGAFRPGVLTALVGVTGAGKTTLMDVLAGRKTGGYVEGSISISGYPKNQATFARITGYCEQNDIHSPNITVYESVVFSSWLRLGKEVKRETRKMFVEEVMNLVELHPVRNFLVGLPGIDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTADTGRTIVCTIHQPSIDIFEAFDELLLMKRGGQIIYSGPLGQQSQKLIEYFEAIPGVPRIKHGYNPATWILEISSPAVESRLKVDFAELYNKSELYQRNQELIKELSMPLEGTKDINFPTKYSLSFITQCKACLWKQHLSYWRNPQYNAVRYFMSIFVGVIFGLIFWKKGDKTDKEQDLMNLMGATFSAIFFLGATNTASVQPVIAIERTVFYRERAAGMYSALPYAIAQVAIECIYVAIQSLTFTLILYSMMGFPWQADKFLWFYYFMFMSFVTFTLYGMMTMALTPNPQIAAIIMSFFLVFWNIFSGFIIPKSQIPIWWRWYYWACPTAWTMYGLLTSQVGDKDTPVEVPGSGSMSVKAYLEKQMGYEYGFLGVVAVAHVAFVALFLFVFAYGIKIFNFQKR* 1452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1899 1451 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 873 1089 IPR027417 -
Apr8g1899 1451 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 185 445 IPR027417 -
Apr8g1899 1451 PANTHER ATP-BINDING CASSETTE TRANSPORTER 11 1451 - -
Apr8g1899 1451 Gene3D - 174 476 IPR027417 -
Apr8g1899 1451 Pfam ABC-2 type transporter 1059 1101 IPR043926 GO:0140359
Apr8g1899 1451 Pfam ABC-2 type transporter 403 455 IPR043926 GO:0140359
Apr8g1899 1451 Pfam Plant PDR ABC transporter associated 751 807 IPR013581 -
Apr8g1899 1451 Pfam ABC transporter 188 370 IPR003439 GO:0005524
Apr8g1899 1451 Pfam ABC transporter 878 1030 IPR003439 GO:0005524
Apr8g1899 1451 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 11 1451 - -
Apr8g1899 1451 Pfam ABC-transporter N-terminal 113 162 IPR029481 -
Apr8g1899 1451 Pfam ABC-2 type transporter 1175 1388 IPR013525 GO:0016020|GO:0140359
Apr8g1899 1451 Pfam ABC-2 type transporter 524 736 IPR013525 GO:0016020|GO:0140359
Apr8g1899 1451 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 172 445 IPR003439 GO:0005524
Apr8g1899 1451 Gene3D - 864 1100 IPR027417 -
Apr8g1899 1451 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 850 1103 IPR003439 GO:0005524
Apr8g1899 1451 SMART AAA_5 887 1079 IPR003593 -
Apr8g1899 1451 SMART AAA_5 197 422 IPR003593 -
Apr8g1899 1451 CDD ABCG_PDR_domain2 847 1085 IPR034003 -
Apr8g1899 1451 MobiDBLite consensus disorder prediction 811 833 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1899 Apr-Chr8 29472575 29487751 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1899 875 1062 Calmodulin-binding Proteins AT2G36910 27.000 7.88e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1899 K08711 - gmx:100786666 2515.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g1899 8 29472575 29487751 Apr8g1899 8 29472575 29487751 ECH