Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1882 ATGGCCACCGAAGACTACTCGCTCCTCGACTCTCCCTCTCACGCGCAGCCCCACATCCACGCGCCCACGCGCCACCACTTCGCTTCCTCCTCCTCCTCCAGTCCCAGCACTCTCCCCGCCGCCGAATCTGCCGCCGCTGACTACTACCCTCACACCTCCTTCTCCGACGCCGCCGAGGACTCCTCCGGTCCCTCCAAATCCGGCTCCGCCGTCCACACCCCCAACTCCAAGCGCGTCTCCGCCGCCGGCAGCCCCTACTTCTACAACAAGAAGCTGAAATCCTCCGCCAATCCCGATCCGGCGACCGACGCGGCTTTCCGCGGAGGCGGTGGCGGCGACTATCGGAAGGACCGAGAAGAGTGGAGCGACACGGCGATCGCATGTCTCTTGGAAGCGTACACGGAGAAGTTCAACCAGCTGAACCGCGGGAACCTCCGCGGCCGCGACTGGGAGGAGGTGGCGAAGGCGGTGGGCGAAAGGTGCGGCGGAGGAGGAGGAGAGGGAAATCATCACAAGTCGTACAAGAGTGTGGAACAGTGCAAGAACAAGATTGATAATTTGAAGAAGAGGTATAAGGTTGAGCTTCAGAGAATTGGGAGTGGTGGCAGTGGCATAGCCACTAGTCTTTGGCATTGGTTTAAGAAGGTTGAAATTATTGTTGGAAACTGTGTGACTGTGAAAAATGTGTCTGATGATGACAAGGAGGGTGGTTGCGGTGGTGGTGCTGGTAGTGGTAGCGGTGGTGCTAGTTCTTCTATATCTAGGCAAACCAAGATCAGGTATGCACCTAGCATTTCCGCCATGGCAAACAACCTCAAAACAAAACCAGCCTCAAATCTAAAATGGCGTAGAGTTTTGTTTAAAATTAGCGGCTCTGCATTGGCTGGAAACTGCCAGAATATTGACCCCGAGGTGGCAATGCAGATTGCTAGGGAAGTGGCAACAGCTTGCTGCCTTGGGGTGGAGGTGGCCATTGTTGTTGGTGGTCGTAACTTCTTTTGTGGAGATGCATGGGTGTCTGCTACCGGGTTGGATAGACCTACGGCATACCAAGTAGGTATGATGGCAACGGTTATGAATTCTATTTTGCTTCAATCTGCTTTGGAGAAGCTGGGTGTTCAGGCACGTGTTCAGAGTGCATTCTCAATCCCAGAGGTCGCTGAACCGTATAACAGGCAGCGTGCCATTAGACATCTTGAGAAAGGAAGGGTTGTCATATTTGGTGGTGTTGGTGCTGGCACTGGAAATCCACTTTTTACCACCGATACAGCTGCAGCTCTCAGAGCTTCTGAGCTTAATGCCGATGCAGTTCTGAAAGGTACTAATGTGAATGGTGTCTTTGACTGCCAATCCCGTAATGATAATGTAACCCTTGATCACATATCCTTTAGAGAAATTGTTTCTAGGGGCATCACCTCCATGGATATGACGGCACTAGCATATTGTGAGGAGAATGGAATACCTGTTGTGGTCTTCAACATGCTTGAGCCGGTGAATGTTTCGAGAGCATTATGTGGAGATAAAGTTGGCACTTTGATCGATCAAACGGGAAGAGTGGAGCATCAGCTTCCTAGTTAA 1578 0.5228 MATEDYSLLDSPSHAQPHIHAPTRHHFASSSSSSPSTLPAAESAAADYYPHTSFSDAAEDSSGPSKSGSAVHTPNSKRVSAAGSPYFYNKKLKSSANPDPATDAAFRGGGGGDYRKDREEWSDTAIACLLEAYTEKFNQLNRGNLRGRDWEEVAKAVGERCGGGGGEGNHHKSYKSVEQCKNKIDNLKKRYKVELQRIGSGGSGIATSLWHWFKKVEIIVGNCVTVKNVSDDDKEGGCGGGAGSGSGGASSSISRQTKIRYAPSISAMANNLKTKPASNLKWRRVLFKISGSALAGNCQNIDPEVAMQIAREVATACCLGVEVAIVVGGRNFFCGDAWVSATGLDRPTAYQVGMMATVMNSILLQSALEKLGVQARVQSAFSIPEVAEPYNRQRAIRHLEKGRVVIFGGVGAGTGNPLFTTDTAAALRASELNADAVLKGTNVNGVFDCQSRNDNVTLDHISFREIVSRGITSMDMTALAYCEENGIPVVVFNMLEPVNVSRALCGDKVGTLIDQTGRVEHQLPS* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1882 525 PANTHER KINASE, PUTATIVE-RELATED 1 519 - -
Apr8g1882 525 CDD AAK_UMPK-PyrH-Ec 283 514 IPR015963 GO:0005737|GO:0006221|GO:0033862
Apr8g1882 525 Pfam Myb/SANT-like DNA-binding domain 118 216 IPR044822 -
Apr8g1882 525 MobiDBLite consensus disorder prediction 25 40 - -
Apr8g1882 525 Gene3D - 273 521 IPR036393 -
Apr8g1882 525 SUPERFAMILY Carbamate kinase-like 280 513 IPR036393 -
Apr8g1882 525 PANTHER URIDYLATE KINASE 1 519 - -
Apr8g1882 525 MobiDBLite consensus disorder prediction 1 114 - -
Apr8g1882 525 Hamap Uridylate kinase [pyrH]. 280 514 IPR015963 GO:0005737|GO:0006221|GO:0033862
Apr8g1882 525 Pfam Amino acid kinase family 284 493 IPR001048 -
Apr8g1882 525 Gene3D - 121 193 - -
Apr8g1882 525 Coils Coil 177 197 - -
Apr8g1882 525 MobiDBLite consensus disorder prediction 55 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1882 Apr-Chr8 29319352 29322384 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1882 109 226 Trihelix Transcription Factor Family AT3G14180 38.655 9.90e-17 80.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Apr8g1882 AA_kinase 1.1e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1882 - - gmx:100791426 775.393