Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1877 ATGCATGCAAGAGGCAAGAAAACAAGCTACAAGCTACCACCGGGACCTTCCCTTCTTACTATCATAAAAAACTCTCTTGATTTGTACAAAAAGCCACAACAGACCATGGCTAAACTTGCTAAGGTGTATGGCCCAATAATGCGTTTTAAGATAGGGCAAGCAACCACCATTGTAGTCTCGTCCACAAACGCAGTCAAAGAGATTCTTCAAACCCATGACACATTATTCTCAGACAGAACAAACCCTGATATTACAACAGCTTATAACCACAACCATTATAGCTTGGTTTTCCTCCCAGTTTCACCTCTTTGGCAAGATCTAAGGAAAATATGCCATGGCCATTTGTTCTCCAACAAGACTCTTGATGCCAGCCAAGACCTTAGGCGCAAGAAACTTCAAGAACTCCTCAGTGATATCCGTCAAAACAGCCTTAAGGGTGAAACAGTGGATGTTGGAAGAGCAGCTTTCATGACTTGCATTAACTTTCTATCCTACACGTTTGTCTCTCAAGATTTTGTTGACTCTGTAGGTAACGGTGAGTATAAGCATATTGTGGGGACTCTCTTGAAAGCAACTGGGACACCTAACTTGGTGGATTATTTCCCAATGTTAAGGTTGTTTGACCCACAAGGCATTCGAAGGCACACCAGTAATTATATTGACAAGTTGTTCGATGTCTTGGACCCCATAATTGAGGAACGGATGAAGCTCAGAAAAGAGATGCATTATGTCACAAACAATGACATGTTAGACACATTGCTTGAAATTTCTGAAGGGAATACCCTGAAGATAAATAAAAAACAGATCAAACATTTATTTCTTGACCTACTTGTGGCGGGAACTGATACAACGGCATATGGATTAGAAAGGACAATGACTGAACTAATGCACAGCCCAGAGGCAATGGCAAAGGCCAAAAAGGAGTTGGAGGAAACCATTGGAAGAGGTAATCCGGTTGAGGAATCAGACGTTGCAAGACTTCCATATTTGCAAGCAGTGATAAAAGAGAGTTTGCGTTTACATCCACCAGCGCCACTTTTGCTCCCTAGGAGAGCCAAGATAGATGTGCAAGTGTGTGGCTACACAATCCCAAAGGGTTCCCAAATCCTTATCAATGAGTGGGCCATTGGTAGGAACCCAAACATATGGGATAATGCACATGTTTTTTCACCTGAAAGATTTTTGGGTTCTGACATTGATGTCAAAGGTCGCAACTTTCAGCTCACCCCATTTGGCAGCGGTCGACGTATATGCCCTGGCTCTCCTCTTGCTGTTAGGATGTTGCATTTGATGTTGGGATCATTGATCAACTCTTTTGATTGGAAACTTGAAAACAATATCAATCCAAAAGACATGGACTTGGATCAATCCCTACGAGCTATTCCAGTTATGAGAAAATAA 1401 0.4204 MHARGKKTSYKLPPGPSLLTIIKNSLDLYKKPQQTMAKLAKVYGPIMRFKIGQATTIVVSSTNAVKEILQTHDTLFSDRTNPDITTAYNHNHYSLVFLPVSPLWQDLRKICHGHLFSNKTLDASQDLRRKKLQELLSDIRQNSLKGETVDVGRAAFMTCINFLSYTFVSQDFVDSVGNGEYKHIVGTLLKATGTPNLVDYFPMLRLFDPQGIRRHTSNYIDKLFDVLDPIIEERMKLRKEMHYVTNNDMLDTLLEISEGNTLKINKKQIKHLFLDLLVAGTDTTAYGLERTMTELMHSPEAMAKAKKELEETIGRGNPVEESDVARLPYLQAVIKESLRLHPPAPLLLPRRAKIDVQVCGYTIPKGSQILINEWAIGRNPNIWDNAHVFSPERFLGSDIDVKGRNFQLTPFGSGRRICPGSPLAVRMLHLMLGSLINSFDWKLENNINPKDMDLDQSLRAIPVMRK* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1877 466 PANTHER CYTOCHROME P450 FAMILY PROTEIN 2 464 - -
Apr8g1877 466 PRINTS P450 superfamily signature 279 296 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g1877 466 PRINTS P450 superfamily signature 332 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g1877 466 PRINTS P450 superfamily signature 409 418 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g1877 466 PRINTS P450 superfamily signature 418 429 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g1877 466 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 2 464 - -
Apr8g1877 466 SUPERFAMILY Cytochrome P450 13 456 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g1877 466 Gene3D Cytochrome P450 5 463 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g1877 466 Pfam Cytochrome P450 13 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g1877 466 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 411 420 IPR017972 GO:0005506|GO:0016705
Apr8g1877 466 PRINTS E-class P450 group I signature 40 59 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g1877 466 PRINTS E-class P450 group I signature 64 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g1877 466 PRINTS E-class P450 group I signature 268 285 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g1877 466 PRINTS E-class P450 group I signature 288 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g1877 466 PRINTS E-class P450 group I signature 331 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g1877 466 PRINTS E-class P450 group I signature 372 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g1877 466 PRINTS E-class P450 group I signature 408 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g1877 466 PRINTS E-class P450 group I signature 418 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1877 Apr-Chr8 29255671 29257195 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1877 3 466 Cytochrome P450 AT2G45550 42.443 5.32e-143 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1877 - - gmx:100800810 768.844