Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1876 ATGGATATTGGTGCAAGTAGTATATTGATGGTGGCGTTGGCATGCGTCGTGATGTATGTTGTTGTGGGTTCACTGCAAGCAAGAAGCAATAAGCTTCCACCGGGACCTTCCCTTGTAACCATAATGAGAAACTCTTTCGAGTTGTACCAAAAGCCACAACAGACAATGGCTAAGCTTGCAAAGTTGTATGGGCCAATAATGCGTTTGAAGATAGGGCAAGCAACGACCATTATAATCTCTTCAGCAAATGCGGCAAAAGAGATCCTCCACACCCACGATGCGTTATTCTCAGACAGAACAAATCCTGATATAACAACAGCTTACAACCACAACAACTATAGCCTTGTGTTTCTCCCATATTCCCCCTTATGGCAAGAACTGAGGAAAATATGCCATGGCAACTTGTTCTCCAAAAAGACCCTTGACGCAAGCCAAGACCTTAGGCGCAAGAAACTTCAAGGACTCCTCAATGATATCCGTGAAAGCAGCCTTAAGGGTGAAGCAGTGGATGTTGGAAGAGCTGCTTTCATGACTTGCATTAACTTTCTATCCTACACTTTTGTCTCTCAGGATTTCGTTGAGTCTCTAGGGAACGAGGAGTACAAGCACGTTGTGGGAACTCTCTTGAAAGCAACTGGGACACCTAACTTGGTGGATTATCTACCAATGTTGAGGATGTTTGACCCACAAGGCATTAGAAGGCACACCACTAATTACATTGACAAGTTGTTCCACATCTTGGACCCCATAATTGACGAAAGGATTAAGCTCAGAAATGGGAAGCACTATGTCACAAACAACGACATGTTAGACATCTTGCTTCAAATTTCTGAAGGGGATAGCCAGAAGATGACTAGGAAACAGATCAAGCATTTATTCCTGGATCTTCTTGTTGCGGGGACTGATACAACAGCATATGGATTAGAAAGGACAATGACCGAACTAATCCACAACCCGGAGGCAATGGCAAAGGCCAAAAAGGAGTTGGAGGAAACGGTTGGAATAGGTAATCCGGTTGAGGAATCAGACATCGGAAGACTTCCATATTTGCAAGCAGTGATAAAAGAGAGTTTGCGTTTACATCCACCAGCACCACTTTTGCTCCCTAGGAGAGCCAAGATAGATGTGCAAGTGTGCGGCTACACAATCCCAAAGGGTTCCCAAGTCCTTATCAATGAGTGGGCTATTGGTAGGAACCCAAACATATGGGATAATGCACATGTTTTTTCACCCGAAAGGTTCTTGGGTTCCGACATTGACGTCAAAGGTCACAATTTTCAGCTCACCCCATTTGGCAGTGGTCGTCGTATATGCCCTGGCTCCCCTCTTGCTATTAGAATGTTGCATTTGATGTTGGGTTCATTGATAAACTCTTTTGATTGGAAGCTTGAAAACAATCTCCATCCAAAAGACATGCACTTGGATCAACCCCTCCGAGCTATTCCACTCTTGGTCAACGACACTTCAAACCCTAGATAA 1479 0.4422 MDIGASSILMVALACVVMYVVVGSLQARSNKLPPGPSLVTIMRNSFELYQKPQQTMAKLAKLYGPIMRLKIGQATTIIISSANAAKEILHTHDALFSDRTNPDITTAYNHNNYSLVFLPYSPLWQELRKICHGNLFSKKTLDASQDLRRKKLQGLLNDIRESSLKGEAVDVGRAAFMTCINFLSYTFVSQDFVESLGNEEYKHVVGTLLKATGTPNLVDYLPMLRMFDPQGIRRHTTNYIDKLFHILDPIIDERIKLRNGKHYVTNNDMLDILLQISEGDSQKMTRKQIKHLFLDLLVAGTDTTAYGLERTMTELIHNPEAMAKAKKELEETVGIGNPVEESDIGRLPYLQAVIKESLRLHPPAPLLLPRRAKIDVQVCGYTIPKGSQVLINEWAIGRNPNIWDNAHVFSPERFLGSDIDVKGHNFQLTPFGSGRRICPGSPLAIRMLHLMLGSLINSFDWKLENNLHPKDMHLDQPLRAIPLLVNDTSNPR* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1876 492 PRINTS P450 superfamily signature 299 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g1876 492 PRINTS P450 superfamily signature 352 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g1876 492 PRINTS P450 superfamily signature 429 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g1876 492 PRINTS P450 superfamily signature 438 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g1876 492 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 431 440 IPR017972 GO:0005506|GO:0016705
Apr8g1876 492 Pfam Cytochrome P450 33 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g1876 492 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 486 - -
Apr8g1876 492 Gene3D Cytochrome P450 25 482 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g1876 492 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g1876 492 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g1876 492 PRINTS E-class P450 group I signature 288 305 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g1876 492 PRINTS E-class P450 group I signature 308 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g1876 492 PRINTS E-class P450 group I signature 351 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g1876 492 PRINTS E-class P450 group I signature 392 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g1876 492 PRINTS E-class P450 group I signature 428 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g1876 492 PRINTS E-class P450 group I signature 438 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g1876 492 SUPERFAMILY Cytochrome P450 33 472 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g1876 492 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1876 Apr-Chr8 29247089 29249029 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1876 1 476 Cytochrome P450 AT2G45550 42.331 7.37e-141 413
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1876 - - gmx:100800810 740.725