Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1870 ATGTTGGAAATGGAGAAGGATTTTGATTCCAAGCTGAAGGTTCAGGCGAATTCTTCCTCTTCCAACGGTGGTGGGAATGTCCAGAGATCCAAGAGCTTTGCTTTTAGGGCTCCCCAGGAGAATTATACCATTCAGGACTTTGAATTGGGCAAGATCTATGGCGTTGGCTCTTATTCTAAGGTTGTGAGGGCAAGGAAGAAGGACACTGGAACTGTGTATGCATTGAAGATCATGGACAAAAAATTTATTACCAAAGAGAACAAAACAGCTTATGTGAAGTTGGAACGCATAGTGCTTGATCAATTGGACCATCCAGGCATTGTGCGGCTATATTTCACATTTCAAGACTCACTTTCTCTGTATATGGCACTTGAGTCCTGTGAAGGTGGAGAACTTTTTGATCAAATAACCAGGAAAGGTCGACTAACAGAGGATGAGGCACGATTCTATGCAGCTGAAGTTGTAGATGCTCTTGAATACATACATAATTTGGGAGTGATACATCGTGATATTAAGCCAGAGAATTTATTACTTACAGCTGAAGGACATATTAAAATAGCCGATTTTGGGAGTGTGAAGCCTATGCAAGATAGCCAAATTACTGTCCTTCCAAATGCCGCATCAGATGACAAAGCCTGCACTTTTGTGGGCACAGCTGCTTATGTCCCTCCAGAGGTTCTTAATTCCTCCCCAGCAACTTTTGGAAATGACCTATGGGCACTTGGCTGCACATTATATCAAATGCTTTCTGGAACTTCCCCTTTTAAAGATGCAAGTGAATGGCTTATTTTTCAAAGAATTATAGCAAGAGAACTTAGATTTCCAGATTACTTTTCTGAGGAAGCAAGAGACGTTATTGATCGGCTATTGGATTTGGACCCCAGCAGGAGACCAGGTGCAGGACCCGATGGTTATGCTTCTTTGAAAAGACATCCATTTTTCAAGGGGGTTGACTGGGATAATTTAAGGTCACAGATTCCTCCAAAACTTGCTCCCGAACCGGGGTCGCCGGCAGGTGATGATGTTCATGACTCATCATGGAGTCCTGCTCACATTGGGGATGGTTCTGCAGCTGTGGTTAGACAACCTGATGGTGCTACATCATCTTCTGAAGGGACTGGTCACATAACCAGGCTAGCTTCAATTGATTCCTTTGATTCAAAATGGCAACAATTTTTGGAACCTGGGGAATCTGTTCTCATGATCTCTATGGTGAAGAAATTACAAAAACTAACAAGCAAGAAGGTGCAGCTCATCCTTACCAACAAACCAAAGTTGATTTATGTGGACCCATCAAAGTTAATTGTGAAAGGAAATATAATATGGTCTGATAATCCAAATGATTTAAGCATCCAAGTGACTAGTCCATCAAATTTCAAGATTTGCACACCTAAAAAGGTAATGTCTTTTGAGGATGCAAAGCAAAGAGCTTATCAGTGGAAAAAGGCAATTGAAGGACTTCAAAACCGGTGA 1473 0.4175 MLEMEKDFDSKLKVQANSSSSNGGGNVQRSKSFAFRAPQENYTIQDFELGKIYGVGSYSKVVRARKKDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGIVRLYFTFQDSLSLYMALESCEGGELFDQITRKGRLTEDEARFYAAEVVDALEYIHNLGVIHRDIKPENLLLTAEGHIKIADFGSVKPMQDSQITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDASEWLIFQRIIARELRFPDYFSEEARDVIDRLLDLDPSRRPGAGPDGYASLKRHPFFKGVDWDNLRSQIPPKLAPEPGSPAGDDVHDSSWSPAHIGDGSAAVVRQPDGATSSSEGTGHITRLASIDSFDSKWQQFLEPGESVLMISMVKKLQKLTSKKVQLILTNKPKLIYVDPSKLIVKGNIIWSDNPNDLSIQVTSPSNFKICTPKKVMSFEDAKQRAYQWKKAIEGLQNR* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1870 490 Pfam PH domain 387 489 IPR033931 -
Apr8g1870 490 ProSitePatterns Serine/Threonine protein kinases active-site signature. 166 178 IPR008271 GO:0004672|GO:0006468
Apr8g1870 490 Gene3D Phosphorylase Kinase; domain 1 45 130 - -
Apr8g1870 490 Gene3D - 366 490 IPR011993 -
Apr8g1870 490 Pfam Protein kinase domain 49 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g1870 490 Coils Coil 470 490 - -
Apr8g1870 490 SMART serkin_6 47 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g1870 490 SUPERFAMILY Protein kinase-like (PK-like) 44 346 IPR011009 -
Apr8g1870 490 PANTHER SERINE/THREONINE-PROTEIN KINASE 21 486 - -
Apr8g1870 490 Gene3D Transferase(Phosphotransferase) domain 1 131 333 - -
Apr8g1870 490 ProSiteProfiles Protein kinase domain profile. 47 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g1870 490 PANTHER 3-PHOSPHOINOSITIDE-DEPENDENT PROTEIN KINASE 1 21 486 - -
Apr8g1870 490 CDD STKc_PDK1 45 314 IPR039046 GO:0004674
Apr8g1870 490 MobiDBLite consensus disorder prediction 325 347 - -
Apr8g1870 490 SUPERFAMILY PH domain-like 308 489 - -
Apr8g1870 490 MobiDBLite consensus disorder prediction 13 29 - -
Apr8g1870 490 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1870 Apr-Chr8 29151035 29158005 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1870 1 490 AGC Kinase Gene Family AT3G10540 83.096 0.0 847
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_PDK1 Apr8g1870 Pkinase 2.3e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1870 K06276 - gmx:100801891 939.488
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g1870 8 29151035 29158005 Apr8g1870 8 29151035 29158005 ECH