Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1849 ATGTCAGGAGAGGAAATCTGGTCATCAACTGAAGAAGAATACGGAAAATCTCTGCCTCCATTTGATAACAAGAGTGGCTACAATTCTAGAACAGGCATTTATCACTCTCTTGTTAAGCTTGGAACCAAGCATGAAATTCCAACAAAGCCTGACCTTAACGCTACTAATTATGTGCTGTCACAGTTTCCACAAGCAGACCTTGCTGAGGCAAGAATTGCATTCATTGATTCAGGTACTAATCGGAGTTTAAGCTATGGCGATCTTCGCCGGTCTATTTACTCCCTTGCATCAGCTTTGTTCCATGGACTTGAGGTTAGGAAAGGTGATGTGGTACTTGTATTGTCACCAAACTCAATCTTATACTCAACCATATGCCTAGCTGTGTTATCGGTTGGAGCAGTTTTGACCACTGCTAACCCTCTCAACACTGAGGCAGAAATTGCCAAGCAATTACGCGATTCAGGTGCTAAACTAGCCATCTCAGCACCTGAGGAGCTACACAAATTGGTCCCAACTGGGATTCCTACAATTCTCACTTTGCGTCCTTCTGATGGGGAAATGTTATCAGTTGAAGAGTTAATAGAAGGCTGTTATAATTCACCAGAGTTGCCACATGTTCCCGTGGCACAATCAGACACTGCTGCTATACTTTACTCTTCAGGGACTACAGGAGTAAGCAAAGGTGTAGTTTTGACACATGCAAATCTCATTTCCATAATGAGACTACTCTTCTGGTCTGCTGATGTAAGTGCATCCCAAGATGATGTTTTCTTGGCCTTCATTCCAATGTTTCATGTGTATGGACTGGTGTTCTTTGGATTAGGATTGTTGTGTGTTGGTGTTAAAACCATTTTGATGCAGAAATTTGATTTCCAAGCTATGCTTGTTGCTATCCAAAAACACAAAGTTAATAACTTACCAGCAGTGCCACCAGTGATCCTTGCACTAGTGAAATATGCAAGCAAAGCTAGATGTGACTTGTCAAGCCTAAGAAGGGTGGGATCAGGTGCTGCACCTTTGAGCAGAGAAGTGTCACAGGAGTTTAGAAAAACGTTCCCTTGGGTTGAACTTAGGCCAGGTTATGGGCTAACAGAAAGTTGCGGGGCTGCATCATTTTTTGTTTCAGATAAAGATGCAAAAGCTCATCAAGATTCATGTGGGAAGTTGATTCCAACTTTTTGTGCAAAAGTGATAGACATTGAAACAGGCAAGCCTTTGCCTCCTTGTAAGGAAGGAGAGTTATGGTTGAAAAGTCCTTCTATTATGAAAGGATATTTAGGAAATATGGAGGCAACAACTGCAACAATTGATTCAGAAGGTTGGTTGAGAACAGGTGATCTTGGTTATATTGATGAGAATGGATTTGTTTATATAGTTGAACGAATAAAGGAGCTAATCAAGCACAATGGGTATCAGGTGGCTCCTGCAGAACTGGAATCTGTGCTGCTAGGTCATCCCCTTATAGTTGATGCAGCAGTTATACCAGTTGAAGATGAAGAAACTGGACAGATACCAATGGCATATGTGGTGAGAGCAGCTGGGTCTAAACTCTCAGAAGATCAAGTCATTCAATATGTTGCAGGCCAGGTGGCTCCATATAAGAAAGTTAGAAGGGTGAGTTTCATTGACACAATTCCAAGGTCAGTTGCTGGTAAGATATTGCGCAAGGATCTTGTTTCTCAAAGCAAATATCAACTTGTCTCCAAGTTATGA 1713 0.4174 MSGEEIWSSTEEEYGKSLPPFDNKSGYNSRTGIYHSLVKLGTKHEIPTKPDLNATNYVLSQFPQADLAEARIAFIDSGTNRSLSYGDLRRSIYSLASALFHGLEVRKGDVVLVLSPNSILYSTICLAVLSVGAVLTTANPLNTEAEIAKQLRDSGAKLAISAPEELHKLVPTGIPTILTLRPSDGEMLSVEELIEGCYNSPELPHVPVAQSDTAAILYSSGTTGVSKGVVLTHANLISIMRLLFWSADVSASQDDVFLAFIPMFHVYGLVFFGLGLLCVGVKTILMQKFDFQAMLVAIQKHKVNNLPAVPPVILALVKYASKARCDLSSLRRVGSGAAPLSREVSQEFRKTFPWVELRPGYGLTESCGAASFFVSDKDAKAHQDSCGKLIPTFCAKVIDIETGKPLPPCKEGELWLKSPSIMKGYLGNMEATTATIDSEGWLRTGDLGYIDENGFVYIVERIKELIKHNGYQVAPAELESVLLGHPLIVDAAVIPVEDEETGQIPMAYVVRAAGSKLSEDQVIQYVAGQVAPYKKVRRVSFIDTIPRSVAGKILRKDLVSQSKYQLVSKL* 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1849 570 Gene3D - 42 463 IPR042099 -
Apr8g1849 570 SUPERFAMILY Acetyl-CoA synthetase-like 64 561 - -
Apr8g1849 570 ProSitePatterns Putative AMP-binding domain signature. 216 227 IPR020845 -
Apr8g1849 570 CDD 4CL 46 558 - -
Apr8g1849 570 Gene3D - 464 566 IPR045851 -
Apr8g1849 570 MobiDBLite consensus disorder prediction 1 21 - -
Apr8g1849 570 Pfam AMP-binding enzyme C-terminal domain 477 552 IPR025110 -
Apr8g1849 570 PANTHER AMP-DEPENDENT SYNTHETASE AND LIGASE FAMILY PROTEIN-RELATED 19 569 - -
Apr8g1849 570 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 19 569 - -
Apr8g1849 570 Pfam AMP-binding enzyme 69 467 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1849 Apr-Chr8 28950306 28952407 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1849 24 566 Monolignol Biosynthesis Gene Families AT4G05160 43.659 2.49e-153 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1849 K10526 - gmx:100783104 962.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g1849 8 28950306 28952407 Apr8g1849 8 28950306 28952407 ECH