Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1832 ATGGGAATTGCGGTGGCAAGTGTTGATTTGTTGAGTGAAAAAGCAACCATGATGAGAGAGTCTCTGCAGAATAGCCAGACAATAACAGACAACGTTGTTTCAATTCTTGGTTCCTTTGATCACCGTCTCTCTGCGCTTGAAACCGCCATGCGTCCCACTCAGATTAGAACTCATTCTATTAGGAAAGCTCATGAGAATATTGATAGGACTTTGAAGGCTGCGGAGGTTGTATTGGCTCACTTTGATCAATATCGTCAGGCAGAGGGCAAAATACTTAAAGGGCCACATGAAGACCTGGAAAACTATCTTGAAGCGATTGATAAGTTGAGAAGCAACATTCAGTTTTTTGGCAGCAAGAAGGGTTTTAAGAGTAGTGATGGTATTGTTGGCCATGCTAATAATTTGCTTGCTAAAGCTATTTCTAAGCTAGAAGTTGAGTTTAAGCAGTTACTATCATCTTACAGGTTTGTATTTTTGTGCTCAATGTTGTTCTCTTTTGACTTTATTCACGTTACCGTGATATTTTCTTTTATTATGTGTGATTTCAGCAAACCTGTGGAACCTGAGCGCCTCTTTGATTGCCTTCCTAACTCAATGCGACCTTCGTCAGGGTCACCTGGCCATGAGGGTGATCCTAGTGGCAAGAATCCTTCTAATCACCATTCTGAGTCTCACAACAATAATGCTGATGCTGTTGTATACACACCTCCTGCCCTTATACCGCCAAGAATTTTGCCACTGCTACATGATTTAGCTCAGCAAATGGTTGAAGCTGGTCACCAACAACAGTTACTCAAAATATACAGGGATGCCCGGTCTAATGTATTGGAAGAGAGCCTCCAAAAACTTGGAGTTGAGAAACTCAACAAAGATGATGTCCAAAAGCTGCAATGGGAGATTTTGGAAGCCAAAATTGGAAACTGGATCCATTTCATGCGTATAGCAGTGAAATTGCTGTTTGCTGGTGAGAGTAAAGTTTGCGATCAGATATTTGAAGGCTTTGATTCACTCACTGAACAGTGCTTTGCTGAGGTGACTACAAACAGTGTCTCTATGCTACTTAGTTTTGGAGAAGCAATTGCCAAAAGCAAGAGATCCCCAGAAAAGTTATTTGTACTTTTGGACATGTATGAAATAATGCAAGAGCTCCATTCAGAGATTGAAACACTTTTTAAAGGCAAAGCTTGCTCTGGAATAAGAGAAGCTGCAACAGGTTTGACAAAACGACTTGCGCAAACAGCTCAGGAGACGTTTGGAGATTTTGAAGAGGCAGTTGAGAAAGATGCTACAAAAACTGCAGTTACAGATGGAACTGTCCATCCTTTGACAAGCTATGTAATTAACTATGTGAAGTTTTTATTTGACTACCGATCCACCTTGAAGCAACTTTTTCAGGAATTTGAAGGTGATGATTCTTCACAGCTAGCATCTGTAACGATGCGAATAATGCAAGCTTTGCAAACCAATTTAGATGGGAAATCAAAGCAGTATAAAGACCTTGCATTGACACATCTTTTTCTCATGAACAATATTCATTATATTGTCAGATCAGTTCGGAGGTCTGAAGCCAAGGATTTGCTGGGGGATGATTGGGTACAACGACATAGGAGGATTGTGCAGCAGCATGCAAATCAATACAAAAGAAATGCTTGGGCAAAGATTCTTCAGTGCCTATCTATTCAGGGCCTTACCTCATCAGGTGGTGGGAGTGGCACTGCTGGTGGTGATGGTGGTGGAACTGGAAGCAGTAGTGGTGCTTCAAGAGCAATTGTTAAAGACAGATTTAAGTCATTCAATGTAATGTTCGAGGAACTCCATCAGAAACAATCTCAATGGACAGTTCCTGACACTGAGTTGCGAGAGTCTCTTAGGCTTGCAGTTGCTGAAGTCTTGTTGCCTGCCTATAGATCGTTTGTGAAACGCTTTGGGCCTCTAGTGGAGAGTGGAAAGAATCCCCAGAAGTACATCAAATACACAGCAGAAGATCTAGACCGAATGTTGGGAGAATTTTTTGAAGGGAAAAACATGAGTGAAACCAAGCGGTAA 2046 0.415 MGIAVASVDLLSEKATMMRESLQNSQTITDNVVSILGSFDHRLSALETAMRPTQIRTHSIRKAHENIDRTLKAAEVVLAHFDQYRQAEGKILKGPHEDLENYLEAIDKLRSNIQFFGSKKGFKSSDGIVGHANNLLAKAISKLEVEFKQLLSSYRFVFLCSMLFSFDFIHVTVIFSFIMCDFSKPVEPERLFDCLPNSMRPSSGSPGHEGDPSGKNPSNHHSESHNNNADAVVYTPPALIPPRILPLLHDLAQQMVEAGHQQQLLKIYRDARSNVLEESLQKLGVEKLNKDDVQKLQWEILEAKIGNWIHFMRIAVKLLFAGESKVCDQIFEGFDSLTEQCFAEVTTNSVSMLLSFGEAIAKSKRSPEKLFVLLDMYEIMQELHSEIETLFKGKACSGIREAATGLTKRLAQTAQETFGDFEEAVEKDATKTAVTDGTVHPLTSYVINYVKFLFDYRSTLKQLFQEFEGDDSSQLASVTMRIMQALQTNLDGKSKQYKDLALTHLFLMNNIHYIVRSVRRSEAKDLLGDDWVQRHRRIVQQHANQYKRNAWAKILQCLSIQGLTSSGGGSGTAGGDGGGTGSSSGASRAIVKDRFKSFNVMFEELHQKQSQWTVPDTELRESLRLAVAEVLLPAYRSFVKRFGPLVESGKNPQKYIKYTAEDLDRMLGEFFEGKNMSETKR* 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1832 681 PANTHER EXOCYST COMPLEX PROTEIN EXO70 175 677 IPR004140 GO:0000145|GO:0006887
Apr8g1832 681 PANTHER EXOCYST COMPLEX PROTEIN EXO70 36 155 IPR004140 GO:0000145|GO:0006887
Apr8g1832 681 Pfam Exo70 exocyst complex subunit 307 668 IPR046364 GO:0000145|GO:0005546|GO:0006887
Apr8g1832 681 Gene3D Exocyst complex component Exo70 214 681 - -
Apr8g1832 681 Gene3D Exocyst complex component Exo70 75 206 - -
Apr8g1832 681 PANTHER EXOCYST COMPLEX COMPONENT EXO70A1-LIKE 175 677 - -
Apr8g1832 681 PANTHER EXOCYST COMPLEX COMPONENT EXO70A1-LIKE 36 155 - -
Apr8g1832 681 MobiDBLite consensus disorder prediction 197 227 - -
Apr8g1832 681 SUPERFAMILY Cullin repeat-like 77 672 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1832 Apr-Chr8 28761968 28770076 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1832 3 681 EXO70 exocyst subunit family AT5G03540 76.100 0.0 1014
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1832 K07195 - gmx:100813987 1146.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g1832 8 28761968 28770076 Apr8g1832 8 28761968 28770076 ECH