Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1812 ATGGCTATGCACATAAATCTGAAGCTCCATAAGCTATATCTTATGATCTTAGTAGCATCAAAAGTAGCATCTCAACCCATGCTACACTGTCCTCAAAACTGTGGCAACCTTAACATTCCTTACCCATTTGGGACAAGCAAGGGTTGTTACATGGACGAAACTTTTCTCATCACTTGCAACCATAGCTCCACCACACCCATTCCTCGATTGGGACCTGACAATATAATGGTGCTCAACATATCACTAGACGACGGAGAACTTCTAGTTTCAAGTCCTGTAGTCCATGATTGCGATGGTGCCAAAGGCAATCATCAAAGTTCTATAGAGGAGAAAGGTCTCAATTTGACTCGGTTTTCAATCTCACCAAGTAAGAACAAATTCACAGCACTGGGTTGTGACACTGTTGGAATATTCATGGGCTATGATAAAAATAAAAACCGTGCCACAACACTGGGATGTGTAGCCATATGTAGCACACTTGATGAAATCATGAAGAACAATGGATCATGTGGTGGCACTGGATGTTGCCAAATTAGTGTTCCCAATGGAGTCTATGGTTTTGAAATGCAAACTTGGAGTATGAACAACCACTCCCCAGTACGTGACTCCTATCCTTGTAACTATGCGTTTTGTGTTGGGGAAGGGTATTACAACTTCAAAACGACAAATCTTGAGAATTTGGAGACTAAGAGCATGCCCGTTGTGCTTGATTGGGCAGTGGGAAATCAAACGTGCGAAGAGGCCCAAAATATTGGTAGCTATGCGTGCAAAGATAAGAACAGTGTTTGCCTCATTTCAACAAACGGGATTGGTTATCGTTGCAAATGCAACAATGGTTTCCAGGGAAACCCTTACGTCCATGGTGGGTGCCAAGATATCAATGAATGCAATATGAAGCCTAACCCATGCATCAGCAGCAAAAAATGCCAAAACTTTCCTGGCAGTTTTAAGTGTTCATGCCCGAAGGGACAGAAAGGAGATGGATTGAGAGATGGAGAAGGTTGCCGACATATAAACGACAAATCCATAGGAAATCTCATACTAATAATTGGACTGAGTTTGAGCTTAACTCTATTGGCAGTAGTCGTGGGATGCATAAACATATGCCCTCAAATCCGTGAAAGAAAGCTCATCAAAATGAGAGAAAGCTATTTCCAAAAAAATGGTGGTTTATTATTACAACAACAGATTGATTCACATCATGGCTCATCTGAAAGAGCCACAATCTTCACTGTTGAGGAGCTGAAGAAAGCGACCAACAACTATGATGAGGACAGAATCATAGGCAAAGGGGGCCATGGAACAGTATACAAAGGTACATTATCAGATGGCAGAGTTGTTGCCATTAAGAAGTCCATGGTTTCTAACCAAAGTGAGATCGAACAATTCATAAACGAAGTTGTTGTGCTTTCCCAAATCAACCACAGGAATGTTGTCAAACTCGTAGGTTGTTGTTTAGAGACACAGTTTCCCCTACTTGTTTATGAGTTCATCACTAATGGGACCCTTTTTGACCATTTACACATTGAGGGTCAAGCATGTTACAATAACAAACTTTCATGGACAACACGTTTAAGAATTGTAGCAGAAACCGCCGAAGCACTTGCATACTTGCATTCAGCTGTTTCCACGCCAATCATTCATAGGGATGTTAAAACTGCAAATATTCTTCTAGATGAAAATCTCACAGCCAAGGTTTCTGACTTTGGAGCTTCAAAGCTTGTTCCTCTTGATCAAACTCAGTTAACCACTTTGGTGCAAGGAACATTGGGCTACCTTGATCCTGAATACTTCCAAACAAGTCAACTAACTGAGAAGAGTGATGTTTATAGCTTTGGCGTTGTGCTTGCAGAAGTGTTGACAAGTAAGAAGGCACTTTCATTTCTCAGGCCTGAGGTTCAAAGAAACTTGTCTATGTATTTTGTTTCTTCAATTGATGAGGATCGCTTGGATCAAATACTAGACAGTGACATTGTGAGTGATGCAAATGTTGTGTATATAATAGAAGTTGCTAATCTAGCAAAGAGGTGTCTTAGGCTAAAGGGGCAAGAAAGACCAAGCATGAAAGAAGTGGCAATGGAGTTGGAGGGAATAAGGGTCATGGAAAAACATTCATTAGGAGGAGCAAATAATGTGTCCAAAGAAGAGACCGAGTGTTTCCTCAAAGTTGGTTCACCCACTACCAACTTTAATGTTGATTGTGGAGTTGGTAGCAGTAGTAGTAGTGCATTTTCTAGGTTCTATAATATGCAAAACCAGATTTTGGAATCACTAGGTGCTGGACGATAA 2289 0.4093 MAMHINLKLHKLYLMILVASKVASQPMLHCPQNCGNLNIPYPFGTSKGCYMDETFLITCNHSSTTPIPRLGPDNIMVLNISLDDGELLVSSPVVHDCDGAKGNHQSSIEEKGLNLTRFSISPSKNKFTALGCDTVGIFMGYDKNKNRATTLGCVAICSTLDEIMKNNGSCGGTGCCQISVPNGVYGFEMQTWSMNNHSPVRDSYPCNYAFCVGEGYYNFKTTNLENLETKSMPVVLDWAVGNQTCEEAQNIGSYACKDKNSVCLISTNGIGYRCKCNNGFQGNPYVHGGCQDINECNMKPNPCISSKKCQNFPGSFKCSCPKGQKGDGLRDGEGCRHINDKSIGNLILIIGLSLSLTLLAVVVGCINICPQIRERKLIKMRESYFQKNGGLLLQQQIDSHHGSSERATIFTVEELKKATNNYDEDRIIGKGGHGTVYKGTLSDGRVVAIKKSMVSNQSEIEQFINEVVVLSQINHRNVVKLVGCCLETQFPLLVYEFITNGTLFDHLHIEGQACYNNKLSWTTRLRIVAETAEALAYLHSAVSTPIIHRDVKTANILLDENLTAKVSDFGASKLVPLDQTQLTTLVQGTLGYLDPEYFQTSQLTEKSDVYSFGVVLAEVLTSKKALSFLRPEVQRNLSMYFVSSIDEDRLDQILDSDIVSDANVVYIIEVANLAKRCLRLKGQERPSMKEVAMELEGIRVMEKHSLGGANNVSKEETECFLKVGSPTTNFNVDCGVGSSSSSAFSRFYNMQNQILESLGAGR* 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1812 762 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 309 320 IPR000152 -
Apr8g1812 762 Pfam Wall-associated receptor kinase galacturonan-binding 30 89 IPR025287 GO:0030247
Apr8g1812 762 ProSitePatterns Serine/Threonine protein kinases active-site signature. 546 558 IPR008271 GO:0004672|GO:0006468
Apr8g1812 762 Gene3D Transferase(Phosphotransferase) domain 1 498 718 - -
Apr8g1812 762 ProSiteProfiles EGF-like domain profile. 292 327 IPR000742 -
Apr8g1812 762 Gene3D Laminin 242 335 - -
Apr8g1812 762 Pfam Calcium-binding EGF domain 292 325 IPR001881 GO:0005509
Apr8g1812 762 CDD STKc_IRAK 428 698 - -
Apr8g1812 762 SMART egfca_6 292 336 IPR001881 GO:0005509
Apr8g1812 762 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 21 710 IPR045274 GO:0007166
Apr8g1812 762 SUPERFAMILY EGF/Laminin 291 327 - -
Apr8g1812 762 SMART egf_5 295 336 IPR000742 -
Apr8g1812 762 SMART egf_5 244 291 IPR000742 -
Apr8g1812 762 CDD EGF_CA 292 327 - -
Apr8g1812 762 ProSitePatterns Protein kinases ATP-binding region signature. 428 451 IPR017441 GO:0005524
Apr8g1812 762 Pfam Protein kinase domain 422 691 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g1812 762 PANTHER WALL-ASSOCIATED RECEPTOR KINASE 2-LIKE ISOFORM X2 21 710 - -
Apr8g1812 762 Gene3D Phosphorylase Kinase; domain 1 388 497 - -
Apr8g1812 762 ProSitePatterns Calcium-binding EGF-like domain signature. 292 318 IPR018097 GO:0005509
Apr8g1812 762 SMART serkin_6 422 698 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g1812 762 SUPERFAMILY Protein kinase-like (PK-like) 404 696 IPR011009 -
Apr8g1812 762 ProSiteProfiles Protein kinase domain profile. 422 707 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1812 Apr-Chr8 28620969 28629730 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1812 7 700 Receptor kinase-like Gene Family AT1G21230 46.197 0.0 587
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Apr8g1812 Pkinase 1.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1812 - - vun:114190859 1078.16