Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1800 ATGGCAGAGGTTAAGTTACATGGATTTTGGTATAGTCCCTTTACTATGAGGGTGGTATGGGCCCTAAAGTTGAAGGGCATATCATATGAGAACATAGAGGAAGACCGTTTCAACAAGAGTCCTCAACTTCTTCAACACAACCCAGTTCACAAGAAGACTCCTGTGCTCGTTCATGGTGGAAAACCCATTTGTGAATCCATGATCATTGTTGAATACATTGATGAGATATGGCCACACAATCCATTGCTTCCTGTTGATCCTTATGAGAGAGCTTTGGCACGTTTTTGGGTCAGATATGCTGAAGACATGGTTTCTTCTACACTTGCGCCATTCTTCCGTAGCAACAATGGTGAAGAGCGAAAGAAGGTCATAGAGAAGATATGGCAGTATTTCAGAGTGGTTGAGGATCAGTGCTTAGATCATCAAGAAAAATATCTTGGGGGGAACACTATTAACGTTGTGGACATAGCTTTTGGATCTGCAGTCAAATTTATTTTGGCTTTGGAAGCAATGTTTGAAGTGGAAGTCTTAGAAGCTCAAAAATTCCCTCGCTTGCATTCATGGTTTTATAATTTTAAGAATGTCCCACTAATTGCAGAAAACCTACCTGATCAGGAGAAACTGGTTACTTTTCTTAAGCCTCTTAGAGAAAAAATGTTAGCATCTTCCTAA 672 0.4018 MAEVKLHGFWYSPFTMRVVWALKLKGISYENIEEDRFNKSPQLLQHNPVHKKTPVLVHGGKPICESMIIVEYIDEIWPHNPLLPVDPYERALARFWVRYAEDMVSSTLAPFFRSNNGEERKKVIEKIWQYFRVVEDQCLDHQEKYLGGNTINVVDIAFGSAVKFILALEAMFEVEVLEAQKFPRLHSWFYNFKNVPLIAENLPDQEKLVTFLKPLREKMLASS* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1800 223 CDD GST_N_Tau 4 77 - -
Apr8g1800 223 CDD GST_C_Tau 87 213 IPR045074 GO:0004364|GO:0006749
Apr8g1800 223 Gene3D Glutaredoxin 1 85 - -
Apr8g1800 223 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 1 217 - -
Apr8g1800 223 SFLD Main (cytGST) 1 222 - -
Apr8g1800 223 Gene3D - 86 223 - -
Apr8g1800 223 SFLD Main.3: Omega- and Tau-like 1 222 IPR045073 -
Apr8g1800 223 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 86 211 IPR010987 -
Apr8g1800 223 SUPERFAMILY Thioredoxin-like 4 103 IPR036249 -
Apr8g1800 223 Pfam Glutathione S-transferase, C-terminal domain 104 200 IPR004046 -
Apr8g1800 223 SUPERFAMILY GST C-terminal domain-like 75 219 IPR036282 -
Apr8g1800 223 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 81 IPR004045 -
Apr8g1800 223 Pfam Glutathione S-transferase, N-terminal domain 3 75 IPR004045 -
Apr8g1800 223 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 217 IPR045073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1800 Apr-Chr8 28519575 28520742 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1800 3 219 Glutathione S-transferase Gene Family AT2G29420 41.014 5.84e-55 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1800 K00799 - gmx:547584 320.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g1800 8 28519575 28520742 Apr8g1800 8 28519575 28520742 ECH