Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1798 ATGAGTAATGAGGATCCATGTAATTCAGGCGAGCAATATAAAAATACGGTGAGTGCTGGTTTAAGTGACAGAATCTCTTCTGATAACGATGTAGACAACATATGTGCACAGACTGGTGAAGAATTTTCAGCTGATTTCTTACGTGACCGGGTTGCTTTAAGGAGATTTCCTGTCATAACAGATGCAGACCAACACCTGCCAAACAGATTGGATTTTAATATCAACAACAACAATAATAATTATCAGCTTGTTTATGAGGATCTAAAGCACGTTCTTGGGCTAAGAAGAACAGATTCTGATAGCAATTCTGAACTGTCAGATATTGCTTTAACTAGAGGGTATGCTACTGAAGTGGACAACAGGGCTTATCCTAATAATTTGAACACGTACCAATGTGAACGTGGCGGTATCAGACAAGTATCAAGTACTTTTTCCAAACAACCCTCAGGTAAGTTTTATGAGGGAAATTGTTATGATCAAGTTAATTCAGGACCAAATGCTCCATCTATCTATGTCATGGAGTCTCCTCTTTCATGCCATCCCCATGGATCATTATTCTCTGAAGGCTCTTTCTATAAGAAGATAAAGTTTCTGTGTAGTTTTGGAGGTAGAATACTGCCAAGGCCAAATGATGGGAAGCTCAGATATGTGGGTGGAGAAACACGGATTATATCAATCAGGAAGAACATCACCTGGGAGGAACTTATGAGGAAGACTTCTGCTATTTGCAGTCAAACTCACATGATCAAATATCAGCTTCCTGGAGAGGATCTTGATGCTCTTATATCTGTTTGTTCTGATGAGGATCTTCATCATATGATTGAGGAGTATGAAGAGCTTGAAAGAGCTGGAGGCTCTCAAAGACTGAGGATTTTTCTCATACCTTCAAACGAACCTGAGAGTCCAAGTTCCAGTGAAGCAAGAGTCAATCATCCAAGTGATGCAGATTATCATTATGTTGTTGCTGTTAATGGTATGTTGGATACAAGTTCGCAAAAGAACTCCAGTGGGCTGAGTTTGGCTAGCCTTACAAGCCAGTTTGGAAATACATCTGATTACAACAGTCCACATCACCGCAGGGACTCATCCATGTCTGCTTTTGCTTCAGAGATGAAGGATTGCATCTCAATCACTTCAAATTTCACAGGCCTACTCTCAAAACCCAGTCCTCAATTTTTAACAGCACTGAATGTAGCAGGCAAGTCATTTAACCAAACGCCACCTTTATCTCCCATTTGTGTACAGCCTAAAGATCCTAAAATTTCTAATGCGCAGCTAGTTATGGATAAACCATATAATGTTGTCAATGAAAGCAGTATTCCCTTTGTTACAGAAAACATTCCACGTGACAACTCTTTGTATGTAGACAATACCAATTATGTTGATCCAGTTGCATACTATAACAATCCTGCTCAAGGGCCTCACATGAATTCCCATCCTAAAAATCAATATATAGTGGAGTCTGACCAGGTCAGGAAGCCTAGTGATAATTTTCATCTTCACAGACGGAATAACAGTAAAGAGTTTATCCCTTCTGCATCATATAGTCTAACTGATATGATTTTTGAGAGACCTTTATGTACCAATGAAGGTTCACATCTTTTTAACAAGATCGTCTCTCATCCTCACGAGTCATCCAGTTTATTCTCAGGGTCTGATAATATAGAGGAATCTCAGTACAGAATCTTGCATGCATGTTCTGACTCAACACTTCAGGAGAATGATGAGAACTATAAAGTTCAGTTGCAATTGCCCCTTAGTGTTGAGAGAGACAAATTACCCTCGCCAAAAAATTCAAGTTCTTTAGAAGAAAGTTCAATACATCCTGGAGAGATAAATGATAAAAAACAAAACTTGGCTAAGTATCAAAATTTGCCCATTTTTGGAATAACTGATAGTTTCAAGAGTGTGTCAGATATTAGTAAAGCGAGCTTGCAATGTGCAGATAAAAGCAATGATTTATTTGGCGAAAATGTTGGACCTATGTCACAAGAAAGTGTCATAGATTTGAAACATTTACAGTACATCTACTCCCCACGTGGTGTTGGCTTATCTTCACCAGATTTACAAAGTAGCAAATACAATGTTTCTACCGCACTGATTCTCTCTTTAGAATCCTCAAGAAACCTGAGGGGGCAGTCACATGGTTTACCATTCGACCCCACTGCTTCTGAGTTTTCCATGAGGAGCCAAAATTCATCAATGCAATATCAATATGGTATGTCGGAGACAGAAGACAATCAACTGCTGCCCCCTGGCTCTTTTGAGTTACAACCTATTGGGTCCCAAACTGACATAGAGCTCATATGCACACATATGCATGTTGCAATTCAGTATACAGACCAGGGTTCGTCTTCCCTAAGAGAGGCTGTTATCCCTGTTGAAGATCCTGCACGTGACCTGCACCAAAAGGAAGATAACACAGTCATTAAGAAACAGTCTTCTGGATACATGGATGAATTTTGTGTCAACAAGCCAGAATCAGTAGCTGGTGTCAAGGGAGCAATTGATTATATTTCTTCAGGTATCCAGTCATGCTTAAAAGTTGTCTCAAATGTAGATGAAGAGGCTGAAATTGAATCTACATCTTCTGAAAAGGAAGGGATGGAATGTGATGATACAGAATCTGAAAGTAAGGATGCAAAAGCTGATAGTGGAAACTTCAATAAGCTTACTGGTGATACAGCAACTGATGAACCAGAGTCTGGCATTTATGGTTTACAGATTATTGAGAATGATGATCTTGAAGAACTGCAAGAGTTAGGATCTGGAACTTTTGGAACTGTTTATCATGGAAAGTGGAGAGGAACAGATGTTGCAATTAAGAGAATAAAAAGTAGTTGTTTCTCCGGTAGATTGTCAGAGCAAGAGCGGTTGACTAAAGATTTTTGGAGAGAGGCACAGATTCTGTCAACTCTTCACCATCCAAATGTCGTGGCATTTTACGGGGTAGTTCCAGATGGCCCAGGTGGAACATTAGCAACAGTAACAGAATACATGGTGCATGGATCACTGAGGAATGTTCTCATGAAGAAGGAGAAAGTGCTTGACCGTCGTAAAAGGCTCCAGATTGCAATGGATGCAGCCTTTGGCATGGAATATTTGCATTTGAAAAATATTGTTCATTTTGATTTGAAGTGTGATAATTTACTTGTCAATCTGGGTGATCCTGAACGACCTGTATGCAAGGTCGGAGATTTTGGCCTATCGAGAATTAAACGCAACACACTTGTTTCTGGTGGTGTCAGAGGAACTCTTCCATGGATGGCACCTGAATTACTAGATGGTAACAGTTGTAGGGTATCTGAGAAGGTTGATATTTTCTCATTTGGCATTGCAATGTGGGAAATCTTGACCGGGGAAGAACCCTATGCTAACATGCACTGTGGTGCTATCATAGGAGGCATTGTGAATAATACGCTGAGGCCTCCTATTCCAAAACGATGTGATTCTGAATGGAAAAAGTTGATGGAAGAGTGCTGGAGTCCTGATCCTGCTGCCAGGCCATCCTTCACAGAAGTTAAAAATAGGCTTCGCAACATGTCATCCGCACTGCCAAAAAAGAGACATAATATTGGGAATCGATGA 3588 0.4008 MSNEDPCNSGEQYKNTVSAGLSDRISSDNDVDNICAQTGEEFSADFLRDRVALRRFPVITDADQHLPNRLDFNINNNNNNYQLVYEDLKHVLGLRRTDSDSNSELSDIALTRGYATEVDNRAYPNNLNTYQCERGGIRQVSSTFSKQPSGKFYEGNCYDQVNSGPNAPSIYVMESPLSCHPHGSLFSEGSFYKKIKFLCSFGGRILPRPNDGKLRYVGGETRIISIRKNITWEELMRKTSAICSQTHMIKYQLPGEDLDALISVCSDEDLHHMIEEYEELERAGGSQRLRIFLIPSNEPESPSSSEARVNHPSDADYHYVVAVNGMLDTSSQKNSSGLSLASLTSQFGNTSDYNSPHHRRDSSMSAFASEMKDCISITSNFTGLLSKPSPQFLTALNVAGKSFNQTPPLSPICVQPKDPKISNAQLVMDKPYNVVNESSIPFVTENIPRDNSLYVDNTNYVDPVAYYNNPAQGPHMNSHPKNQYIVESDQVRKPSDNFHLHRRNNSKEFIPSASYSLTDMIFERPLCTNEGSHLFNKIVSHPHESSSLFSGSDNIEESQYRILHACSDSTLQENDENYKVQLQLPLSVERDKLPSPKNSSSLEESSIHPGEINDKKQNLAKYQNLPIFGITDSFKSVSDISKASLQCADKSNDLFGENVGPMSQESVIDLKHLQYIYSPRGVGLSSPDLQSSKYNVSTALILSLESSRNLRGQSHGLPFDPTASEFSMRSQNSSMQYQYGMSETEDNQLLPPGSFELQPIGSQTDIELICTHMHVAIQYTDQGSSSLREAVIPVEDPARDLHQKEDNTVIKKQSSGYMDEFCVNKPESVAGVKGAIDYISSGIQSCLKVVSNVDEEAEIESTSSEKEGMECDDTESESKDAKADSGNFNKLTGDTATDEPESGIYGLQIIENDDLEELQELGSGTFGTVYHGKWRGTDVAIKRIKSSCFSGRLSEQERLTKDFWREAQILSTLHHPNVVAFYGVVPDGPGGTLATVTEYMVHGSLRNVLMKKEKVLDRRKRLQIAMDAAFGMEYLHLKNIVHFDLKCDNLLVNLGDPERPVCKVGDFGLSRIKRNTLVSGGVRGTLPWMAPELLDGNSCRVSEKVDIFSFGIAMWEILTGEEPYANMHCGAIIGGIVNNTLRPPIPKRCDSEWKKLMEECWSPDPAARPSFTEVKNRLRNMSSALPKKRHNIGNR* 1196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1798 1195 Pfam Protein tyrosine and serine/threonine kinase 917 1178 IPR001245 GO:0004672|GO:0006468
Apr8g1798 1195 Gene3D - 213 296 - -
Apr8g1798 1195 ProSiteProfiles Protein kinase domain profile. 915 1185 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g1798 1195 MobiDBLite consensus disorder prediction 593 607 - -
Apr8g1798 1195 PANTHER SERINE-THREONINE PROTEIN KINASE 91 1192 - -
Apr8g1798 1195 Gene3D Phosphorylase Kinase; domain 1 908 1002 - -
Apr8g1798 1195 SUPERFAMILY CAD & PB1 domains 210 302 - -
Apr8g1798 1195 MobiDBLite consensus disorder prediction 857 899 - -
Apr8g1798 1195 Gene3D Transferase(Phosphotransferase) domain 1 1003 1194 - -
Apr8g1798 1195 SMART serkin_6 915 1185 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g1798 1195 PRINTS Tyrosine kinase catalytic domain signature 997 1010 IPR001245 GO:0004672|GO:0006468
Apr8g1798 1195 PRINTS Tyrosine kinase catalytic domain signature 1034 1052 IPR001245 GO:0004672|GO:0006468
Apr8g1798 1195 PRINTS Tyrosine kinase catalytic domain signature 1105 1127 IPR001245 GO:0004672|GO:0006468
Apr8g1798 1195 PRINTS Tyrosine kinase catalytic domain signature 1149 1171 IPR001245 GO:0004672|GO:0006468
Apr8g1798 1195 CDD STKc_MAP3K-like 921 1178 - -
Apr8g1798 1195 MobiDBLite consensus disorder prediction 862 884 - -
Apr8g1798 1195 ProSitePatterns Protein kinases ATP-binding region signature. 921 942 IPR017441 GO:0005524
Apr8g1798 1195 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 91 1192 - -
Apr8g1798 1195 SUPERFAMILY Protein kinase-like (PK-like) 905 1178 IPR011009 -
Apr8g1798 1195 Pfam PB1 domain 210 294 IPR000270 GO:0005515
Apr8g1798 1195 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1040 1052 IPR008271 GO:0004672|GO:0006468
Apr8g1798 1195 MobiDBLite consensus disorder prediction 589 612 - -
Apr8g1798 1195 CDD PB1_UP2 198 294 - -
Apr8g1798 1195 SMART PB1_new 209 296 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1798 Apr-Chr8 28495530 28502875 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1798 37 336 MAP Kinase Kinase Kinase AT1G16270 40.667 3.75e-43 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Apr8g1798 PK_Tyr_Ser-Thr 2.2e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1798 - - aprc:113872358 2365.88