Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1781 ATGTATTGGGGAGTTATGGCAGGAAACATGGGATGGGGTGCAATAGAAGAAGATGGATGGAGAAAGGGACCTTGGACTGCTGAGGAGGATAAATTGCTTATTCAGTATGTCAGGTTGCATGGTGAAGGCAGATGGAATTCCGTTGCTAGGCTTGCAGGACTAAAAAGAAATGGGAAGAGCTGCAGATTGAGATGGGTGAATTACCTGAGACCAGACCTCAAGAAGGGTCAGATAACACCACAAGAAGAAAGCATAATTCTAGAGCTGCATGCTAGGTGGGGAAACAGGTGGTCAACAATTGCAAGAAGCTTACCAGGAAGAACAGACAATGAAATAAAGAATTATTGGAGGACCCATTTCAAGAAAAAGGCTAAAACCCCTTCCGATGCTGCTGCAAAGGTTAAAATTCGTTCCTCAAGGAGGCAAACATTTCAACAGCAACAACAGCAGTTGAAGCAGAAGCTGCAGCAGCAGGAGGTTGAGCAGCAACAACAGCTTCAGTTCAACTTGGACATGAAAGGTATCATAAACTTGCTTGAAGAAAATGACCATAGAGTGCCTTCTATATCTCAAGAGACCCAAGAAATGGTGAGCATGTACCCAATTACAATGGAACAGCAGGGGTACTTCTACTCTTTGCTCAATGACAATGACAATGTCTCTGCACCAGAGTCCTCAAACGAAGAATTTTTGTGGGATGGACTATGGAACTTGGATGATGTTTTTTGTAATTTCAATGTAGGTAGTGCTACAAGCAAAGCCAGTGTGCACAATTTAGTTACTCCCTTCTATTAA 795 0.4289 MYWGVMAGNMGWGAIEEDGWRKGPWTAEEDKLLIQYVRLHGEGRWNSVARLAGLKRNGKSCRLRWVNYLRPDLKKGQITPQEESIILELHARWGNRWSTIARSLPGRTDNEIKNYWRTHFKKKAKTPSDAAAKVKIRSSRRQTFQQQQQQLKQKLQQQEVEQQQQLQFNLDMKGIINLLEENDHRVPSISQETQEMVSMYPITMEQQGYFYSLLNDNDNVSAPESSNEEFLWDGLWNLDDVFCNFNVGSATSKASVHNLVTPFY* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1781 264 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 1 257 IPR044676 GO:0003700|GO:0006355|GO:0043565
Apr8g1781 264 Pfam Myb-like DNA-binding domain 22 69 IPR001005 -
Apr8g1781 264 Pfam Myb-like DNA-binding domain 75 119 IPR001005 -
Apr8g1781 264 Gene3D - 79 123 - -
Apr8g1781 264 SUPERFAMILY Homeodomain-like 20 116 IPR009057 -
Apr8g1781 264 SMART sant 74 122 IPR001005 -
Apr8g1781 264 SMART sant 21 71 IPR001005 -
Apr8g1781 264 CDD SANT 24 69 IPR001005 -
Apr8g1781 264 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 21 69 IPR017930 -
Apr8g1781 264 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 70 124 IPR017930 -
Apr8g1781 264 PANTHER MYB TRANSCRIPTION FACTOR 1 257 - -
Apr8g1781 264 Coils Coil 141 165 - -
Apr8g1781 264 Gene3D - 22 74 - -
Apr8g1781 264 CDD SANT 79 120 IPR001005 -
Apr8g1781 264 ProSiteProfiles Myb-like domain profile. 17 69 IPR001005 -
Apr8g1781 264 ProSiteProfiles Myb-like domain profile. 70 120 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1781 Apr-Chr8 28352194 28353411 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1781 17 263 MYB Transcription Factor Family AT4G13480 56.180 2.70e-82 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Apr8g1781 Myb_DNA-binding 2.3e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1781 K09422 - gmx:100813935 440.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g1781 8 28352194 28353411 Apr8g1781 8 28352194 28353411 ECH