Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1755 ATGGCTCTAAGCCAATTAGATTTCATGATATTGGGATATGACAAAGTCGGCATTAAACAAGTTGCAACACTGGCAAATCCTTGGTGGACAGGTCAGGGAGGGTTATCTGGGGTTGACCCAGGAACCCATTCACCAGGCCTAAGCAAACGCCACACAGACCTTGCAATCAACGAAACCAGTGGTGGTCATAATAGAGAAGAAGATGAAGACAATAGAGATGAACCTAAAGAGGGTGCAGTTGATGTTGGAACCCGCAGACCAAGAGGAAGACCACCTGGATCCAAAAACAAGCCAAAACCACCCATCTTTGTGACAAGAGACAGTCCAAATGCCCTCAGGAGCCACGTGATGGAGATAGCTGGAGGAGCTGATGTTGCAGAAAGTGTAGCCCAGTTCGCAAGGAGGCGTCAACGTGGGGTTTGTGTTCTCAGTGGTAGTGGCTCTGTGGCCAATGTTACTATAAGACAACCTGCTGCTCCTGGTGCTGTGGTGGCACTTCATGGAAGGTTTGAAATTCTGTCCCTAACTGGGGCTTTTCTACCTGGCCCTGCTCCCCCAGGATCCACGGGACTTACCGTGTACCTCGCCGGAGGACAAGGCCAGGTAATAGGAGGAAGCGTGGTTGGCTCTCTCGTTGCAGCAGGACCAGTTATGGTCATTGCTGCAACTTTTGCTAATGCAACGTACGAGAGACTGCCACTTGATGATGATGATGAGGGGCCTAGTTCGGCTGCGGCACAAGGTGGAGGATCGCCGCCTGGAATTGGAAGCGGTGGGGTTGGTCAGTTGCAGAGTGGGATCCCAGATCCAACATCGCTTCCTTTGTATAATTTGGCACCAAATTTGATGCCAAATGGAGGAGGAGGAGGAGGAGGAGGACAGGTGGGGCATGAAACTTTTGCTTGGGCTCATGGACGGCCACCGTACTGA 930 0.5151 MALSQLDFMILGYDKVGIKQVATLANPWWTGQGGLSGVDPGTHSPGLSKRHTDLAINETSGGHNREEDEDNRDEPKEGAVDVGTRRPRGRPPGSKNKPKPPIFVTRDSPNALRSHVMEIAGGADVAESVAQFARRRQRGVCVLSGSGSVANVTIRQPAAPGAVVALHGRFEILSLTGAFLPGPAPPGSTGLTVYLAGGQGQVIGGSVVGSLVAAGPVMVIAATFANATYERLPLDDDDEGPSSAAAQGGGSPPGIGSGGVGQLQSGIPDPTSLPLYNLAPNLMPNGGGGGGGGQVGHETFAWAHGRPPY* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1755 309 MobiDBLite consensus disorder prediction 56 109 - -
Apr8g1755 309 MobiDBLite consensus disorder prediction 287 309 - -
Apr8g1755 309 MobiDBLite consensus disorder prediction 232 266 - -
Apr8g1755 309 Gene3D - 112 239 - -
Apr8g1755 309 SUPERFAMILY AF0104/ALDC/Ptd012-like 109 236 - -
Apr8g1755 309 ProSiteProfiles PPC domain profile profile. 109 247 IPR005175 -
Apr8g1755 309 Pfam Plants and Prokaryotes Conserved (PCC) domain 113 225 IPR005175 -
Apr8g1755 309 MobiDBLite consensus disorder prediction 60 84 - -
Apr8g1755 309 CDD DUF296 113 224 IPR005175 -
Apr8g1755 309 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 57 309 IPR014476 GO:0003680
Apr8g1755 309 PIRSF ESCAROLA 37 309 IPR014476 GO:0003680
Apr8g1755 309 PANTHER DNA-BINDING PROTEIN-LIKE 57 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1755 Apr-Chr8 28025564 28031973 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1755 24 309 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 60.535 3.59e-104 304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1755 - - var:108341460 431.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g1755 8 28025564 28031973 Apr8g1755 8 28025564 28031973 ECH