Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1748 ATGGAACAGAAAAGATTTTCTGTTGTGCTTGTATACAGAGAGTTCAAGCCACACCTGCTTATGGTCTTAGCCCAGGTGGGCTATACCCTCTTATATTTCATCACTGAAACCTCCTTCAATCATGGGATGAATCCTTATGTGTATGTAACCTATCGCCATGTTGTGGCTGGGGTTGTGATGTTCCCTTTTGCATACTTTCTGGAGAGGAAAGCAAGACCAAAGCTGACATTTGCTCTTTTCATGGAAATATTTTTGCTTTCTCTGTTAGGGATTACTTTGACTGTTAATACGTACTTTGCAAGCCTGCAATACACAAGTTCAACCTTTGTTGCTTCCATGGTCAACACCATAGCTTGCATGACCTTCCTTATTGCAGTGGCTCTCAAGCTTGAGGCTCTTGATCTTCGAAATCCTCGTGGGATAGCGAAGGTTCTAGGGACCTTGATCTCCTTAGCTGGTGTACTGATCATGACGCTATACAAAGGACCCGTTGTGAGAAATTTATGGCATCCTCTAATCCATATTCCACGGAAAAATGCTGCTATCACTGAAAACTGGTTAAAGGGTTCACTTCTTACAGTTTCAAGCTGTGTTACATGGTCTCTATGGTTTATTATGCAGGCAATCACATTGAAAAGATATCCTGCTCAACTATCACTCACTACGTGGATGTGTTTGGTTGGAGCAACACAATCAGCTGTTTTCACAGTTATAGCAGAACACAACCGTTCAGCATGGACTATAGGGTTCAACATTGACTTGTGGTCCACACTATATGGTGGAGTTGTCGTTGCTGGTTTGCTAACTTACGTTCAACTATGGTGCACTGAGAAAAAAGGGCCCGTTTTTGTCACCATGTTTAGCCCTCTTTCTACGATATTAGTGGCAATTCTCGCCTACTTTGTCCTTGGAGAGAAACTTTATCTGGGCAGCATCATAGGTACATCGATTGTCATCATGGGTCTGTACTTGCTGTTGTGGGGCAAAGAAGGTGATCAAGAGGTTTGTATCAAGACCGAAGATAAATTGCAGTGTTGTACTGAAGACCCAGAATGCGAAATATAG 1065 0.4254 MEQKRFSVVLVYREFKPHLLMVLAQVGYTLLYFITETSFNHGMNPYVYVTYRHVVAGVVMFPFAYFLERKARPKLTFALFMEIFLLSLLGITLTVNTYFASLQYTSSTFVASMVNTIACMTFLIAVALKLEALDLRNPRGIAKVLGTLISLAGVLIMTLYKGPVVRNLWHPLIHIPRKNAAITENWLKGSLLTVSSCVTWSLWFIMQAITLKRYPAQLSLTTWMCLVGATQSAVFTVIAEHNRSAWTIGFNIDLWSTLYGGVVVAGLLTYVQLWCTEKKGPVFVTMFSPLSTILVAILAYFVLGEKLYLGSIIGTSIVIMGLYLLLWGKEGDQEVCIKTEDKLQCCTEDPECEI* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1748 354 PANTHER WAT1-RELATED PROTEIN 15 342 - -
Apr8g1748 354 PANTHER WAT1-RELATED PROTEIN 15 342 IPR030184 GO:0016021|GO:0022857
Apr8g1748 354 SUPERFAMILY Multidrug resistance efflux transporter EmrE 246 329 - -
Apr8g1748 354 Pfam EamA-like transporter family 188 326 IPR000620 GO:0016020|GO:0016021
Apr8g1748 354 Pfam EamA-like transporter family 18 158 IPR000620 GO:0016020|GO:0016021
Apr8g1748 354 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1748 Apr-Chr8 27942171 27944623 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1748 16 353 Nodulin-like Gene Family AT5G07050 41.880 7.50e-97 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1748 - - gmx:100527877 595.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g1748 8 27942171 27944623 Apr8g1748 8 27942171 27944623 ECH