Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1743 ATGGATGAAGATGGATCAAGGGGAAAGGACGCTGGAGATGTCCGGTACCGAGGCGTACGCCGGCGTCCGTGGGGCAAGTTCGCGGCGGAGATTCGAGACTCCACGAGGCAGGGGCAGAGGGTGTGGCTTGGAACTTTCAACACGGCGGAGGAAGCAGCCAGAGCCTATGACAGAGCTGCTTACGCCATGAGAGGTCCATTTGCAATCCTTAACTTTCCTAATGAGTACCCTATGACTGCTGGTGGTGCCAGTGCTGCCACTCATTCCTCTGCTTCTTCTTCTTCCTCTGCCTCTACTTCAAGGCAAACCAATGTAGAAGGCAGAGGAAGGAATGAGCAAGGAAGACAAGTGTTTGAGTTTGAGTATTTGGATGACAAGTTGTTGGAGGAGCTTCTTGATTGTGAGGACAAAAACAAAAGGGGTCCCTGA 429 0.5221 MDEDGSRGKDAGDVRYRGVRRRPWGKFAAEIRDSTRQGQRVWLGTFNTAEEAARAYDRAAYAMRGPFAILNFPNEYPMTAGGASAATHSSASSSSSASTSRQTNVEGRGRNEQGRQVFEFEYLDDKLLEELLDCEDKNKRGP* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1743 142 CDD AP2 15 74 IPR001471 GO:0003700|GO:0006355
Apr8g1743 142 PRINTS Ethylene responsive element binding protein signature 16 27 IPR001471 GO:0003700|GO:0006355
Apr8g1743 142 PRINTS Ethylene responsive element binding protein signature 39 55 IPR001471 GO:0003700|GO:0006355
Apr8g1743 142 PANTHER DNA-BINDING DOMAIN 10 136 IPR044808 GO:0003700|GO:0009873
Apr8g1743 142 MobiDBLite consensus disorder prediction 78 116 - -
Apr8g1743 142 Pfam AP2 domain 15 65 IPR001471 GO:0003700|GO:0006355
Apr8g1743 142 ProSiteProfiles AP2/ERF domain profile. 15 73 IPR001471 GO:0003700|GO:0006355
Apr8g1743 142 Gene3D AP2/ERF domain 14 74 IPR036955 GO:0003700|GO:0006355
Apr8g1743 142 PANTHER BNAA01G23960D PROTEIN 10 136 - -
Apr8g1743 142 SUPERFAMILY DNA-binding domain 15 74 IPR016177 GO:0003677
Apr8g1743 142 SMART rav1_2 15 79 IPR001471 GO:0003700|GO:0006355
Apr8g1743 142 MobiDBLite consensus disorder prediction 83 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1743 Apr-Chr8 27907465 27907893 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1743 10 139 AP2-EREBP Transcription Factor Family AT3G23230 63.077 5.01e-44 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Apr8g1743 AP2 1.8e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1743 - - gmx:100775830 210.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g1743 8 27907465 27907893 Apr8g1743 8 27907465 27907893 ECH