Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1742 ATGGAGGATCACCAAAGGGGAAAGCAAGGCAAAGAGGAGAAGGGAAGGGAAGAAGTGCGCTACCGTGGCGTTCGGCGGAGGCCGTGGGGGAAGTACGCGGCGGAGATAAGAGATCCATCAAAGCAAGGGACAAGGGTGTGGTTAGGGACATTTGATACTGCTGAAGAAGCTGCTAGAGCTTATGATCGTGCAGCGTTTAACTTGAGGGGTCATCTTGCAATTCTCAATTTTCCTAATGAGTACTATTCTCAAATAAGGGGTTCTCCACCATATCCACCTCATTTGGCATCACCCTCTTCCTCTTCTCATGCAAGTGGTAGCAGTTCTTCCTGTGCACAACAAAGGCATGTTTTCGAGTTCGAGTGTTTGGACGATAAGGTGTTGGAGGATCTTCTTGATCAGTCTGAGGAGCACAAGAAGAAAAGGAAGGGAGATTGA 438 0.484 MEDHQRGKQGKEEKGREEVRYRGVRRRPWGKYAAEIRDPSKQGTRVWLGTFDTAEEAARAYDRAAFNLRGHLAILNFPNEYYSQIRGSPPYPPHLASPSSSSHASGSSSSCAQQRHVFEFECLDDKVLEDLLDQSEEHKKKRKGD* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1742 145 Pfam AP2 domain 20 71 IPR001471 GO:0003700|GO:0006355
Apr8g1742 145 PRINTS Ethylene responsive element binding protein signature 21 32 IPR001471 GO:0003700|GO:0006355
Apr8g1742 145 PRINTS Ethylene responsive element binding protein signature 44 60 IPR001471 GO:0003700|GO:0006355
Apr8g1742 145 SMART rav1_2 20 84 IPR001471 GO:0003700|GO:0006355
Apr8g1742 145 ProSiteProfiles AP2/ERF domain profile. 20 78 IPR001471 GO:0003700|GO:0006355
Apr8g1742 145 SUPERFAMILY DNA-binding domain 20 79 IPR016177 GO:0003677
Apr8g1742 145 CDD AP2 20 79 IPR001471 GO:0003700|GO:0006355
Apr8g1742 145 MobiDBLite consensus disorder prediction 83 109 - -
Apr8g1742 145 PANTHER ETHYLENE RESPONSE FACTOR 1 136 - -
Apr8g1742 145 Gene3D AP2/ERF domain 19 79 IPR036955 GO:0003700|GO:0006355
Apr8g1742 145 PANTHER DNA-BINDING DOMAIN 1 136 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1742 Apr-Chr8 27896768 27897205 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1742 18 140 AP2-EREBP Transcription Factor Family AT3G23230 70.161 1.25e-51 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Apr8g1742 AP2 1.5e-17 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1742 - - gmx:100793703 190.274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g1742 8 27896768 27897205 Apr8g1742 8 27896768 27897205 ECH