Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1740 ATGGACTCATCCATCTTCAACACCTCCAATTCCGACTTCTCGTCGGAATCTTCCTCCTCGGAGCCGTTTTCGTGGAACGGATATCTTCCGTTCAACGAGAACGACTCAGAAGAAATGCTTTTGTACGGCATGATCGCCGACGCCAACACCCTCTCGGCGGAGAGGGTGAAGGAAGAGGAAGTGAGTTCCGAAGAGAGTAGCACGAGGAAGGAGAAGTCGTACCGCGGCGTGAGGCGGCGGCCGTGGGGGAAGTTTGCGGCGGAGATAAGGGATTCAACGAGGCATGGGACGAGGGTGTGGTTGGGGACATTTGATAGCGCTGAAGCAGCAGCGTTGGCTTATGATCAAGCTGCGTTTTCCATGAGAGGCTCTGCGGCCATTCTCAACTTCCCCGTTGAGGTTGTTAGAGAGTCTCTTCGGGAGATGAACTATGGCTCCGAAGAAGGGTGCTCTCCTGTTGTCGCTCTCAAGAGGAAGCACTCTCTGAGAAGGAAAATTGGTGTTAAGAAGAACAAAGAAATTTGTGGGGTTAGGAATAGGGTAGACAATGCGGTCGTGTTTGAAGATCTTGGTGCTGATTATTTGGAACAATTGTTGATCTCTTCTGATCATGTTCCTTGCACTTGGTGA 630 0.5111 MDSSIFNTSNSDFSSESSSSEPFSWNGYLPFNENDSEEMLLYGMIADANTLSAERVKEEEVSSEESSTRKEKSYRGVRRRPWGKFAAEIRDSTRHGTRVWLGTFDSAEAAALAYDQAAFSMRGSAAILNFPVEVVRESLREMNYGSEEGCSPVVALKRKHSLRRKIGVKKNKEICGVRNRVDNAVVFEDLGADYLEQLLISSDHVPCTW* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1740 209 Pfam AP2 domain 73 123 IPR001471 GO:0003700|GO:0006355
Apr8g1740 209 PRINTS Ethylene responsive element binding protein signature 74 85 IPR001471 GO:0003700|GO:0006355
Apr8g1740 209 PRINTS Ethylene responsive element binding protein signature 97 113 IPR001471 GO:0003700|GO:0006355
Apr8g1740 209 MobiDBLite consensus disorder prediction 1 25 - -
Apr8g1740 209 ProSiteProfiles AP2/ERF domain profile. 73 131 IPR001471 GO:0003700|GO:0006355
Apr8g1740 209 Gene3D AP2/ERF domain 72 134 IPR036955 GO:0003700|GO:0006355
Apr8g1740 209 SMART rav1_2 73 137 IPR001471 GO:0003700|GO:0006355
Apr8g1740 209 PANTHER DNA-BINDING DOMAIN 24 201 IPR044808 GO:0003700|GO:0009873
Apr8g1740 209 CDD AP2 72 132 IPR001471 GO:0003700|GO:0006355
Apr8g1740 209 MobiDBLite consensus disorder prediction 54 72 - -
Apr8g1740 209 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1B 24 201 - -
Apr8g1740 209 SUPERFAMILY DNA-binding domain 73 133 IPR016177 GO:0003677
Apr8g1740 209 MobiDBLite consensus disorder prediction 54 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1740 Apr-Chr8 27816565 27817536 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1740 29 209 AP2-EREBP Transcription Factor Family AT3G23240 63.587 8.09e-75 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Apr8g1740 AP2 1e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1740 K14516 - gmx:100790598 277.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g1740 8 27816565 27817536 Apr8g1740 8 27816565 27817536 ECH