Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1734 ATGACTCAAGACCTCAAACGAGACTACGTCGTTTTGGAAGAAATCGGCCGGGGAAGATTCGGCACCGTTTTCCGATGCTCTTCCGTCGATTCCGGTGACTCCTTCGCTGTTAAATCCATCGACAAAGAGGCCGTAACCGCCGCCGGAGACTCCCTCGACGCCCAATGCCTATTAACGGAGCCCAAGATTCTTGACCTTCTCTCCCCTCACCCTCACATCGTTAACCTCCACGGCCTCTACGAGGATGAAACCCACCTCCACATGGTTCTCGACCTTTGTTACGAATCCGACCTTCACCAACGGGTCATGCTCGAACCGGAAGCCGCTTCCGTCTTGTATCAACTCATGCAAGCCGTGGCCTACTGCCACGGCCTCGGCGTGGCTCACCGAGACATAAAGCCCGACAACATTCTCTTCGACGACGAGAATCGGCTCAAGTTAGCCGACCTCGGCTCGGCTGAGATTTTTCAGGAGGGGGAGCCGATGAGCGGCATCGTGGGGACGCCGCATTACGTGGCGCCAGAGGTCCTCGCCGGACGGGATTACACCGAGAAGGTCGACGTGTGGAGCGCCGGCGTCATTTTATATGAAATGTTGGCTGGGTTTCCGCCTTTTCGCGGCGATTCGCCGGTGGAGATTTTTGAGGCCGTGCTTCGAGCCAATTTGAGATTTCCTAGCCGAGTTTTTTGCTCCGTGTCACCGGCGGCTAAGGATCTGCTTCGTAGAATGCTGTGTAAAGACGTTTCTAGAAGGTTCTCCGCGGAACAAGTCCTAGCGCACCCATGGTTTAGCATTGCGGAACAGGGCATGCGAGCAGAATGA 822 0.5572 MTQDLKRDYVVLEEIGRGRFGTVFRCSSVDSGDSFAVKSIDKEAVTAAGDSLDAQCLLTEPKILDLLSPHPHIVNLHGLYEDETHLHMVLDLCYESDLHQRVMLEPEAASVLYQLMQAVAYCHGLGVAHRDIKPDNILFDDENRLKLADLGSAEIFQEGEPMSGIVGTPHYVAPEVLAGRDYTEKVDVWSAGVILYEMLAGFPPFRGDSPVEIFEAVLRANLRFPSRVFCSVSPAAKDLLRRMLCKDVSRRFSAEQVLAHPWFSIAEQGMRAE* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1734 273 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Apr8g1734 273 Pfam Protein kinase domain 9 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g1734 273 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE KINASE 1 3 266 - -
Apr8g1734 273 PANTHER SERINE/THREONINE-PROTEIN KINASE 3 266 - -
Apr8g1734 273 SUPERFAMILY Protein kinase-like (PK-like) 5 264 IPR011009 -
Apr8g1734 273 PIRSF ILK 3 260 - -
Apr8g1734 273 Gene3D Transferase(Phosphotransferase) domain 1 93 273 - -
Apr8g1734 273 SMART serkin_6 9 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g1734 273 CDD STKc_CAMK 8 262 - -
Apr8g1734 273 ProSitePatterns Serine/Threonine protein kinases active-site signature. 127 139 IPR008271 GO:0004672|GO:0006468
Apr8g1734 273 ProSiteProfiles Protein kinase domain profile. 9 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g1734 273 Gene3D Phosphorylase Kinase; domain 1 1 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1734 Apr-Chr8 27718162 27719687 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1734 3 263 EF-hand Containing Proteins AT1G50700 41.636 1.26e-68 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Apr8g1734 Pkinase 1.5e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1734 - K08794 gmx:547731 484.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g1734 8 27718162 27719687 Apr8g1734 8 27718162 27719687 ECH