Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1699 ATGGGATTCTATCTACGTCTCAAGCTCAAGGCATTCCGGCTGAAACGGTTTCTTCTAGGACATGATGGCAGAAGGAGAAAGCACATGCAGGCAAAGAAACCTTCATGGATGATGCCAATAACACATGGTTATCATGTGGTGGAGCATAATTTGACCAGAGATGGTTCTGATGATACAGACTTTGATTCAGTTGTGGCACAGAGAGAGCAAATGGATCACACAGAATTGTGGTATTTTGAAATCTCCGATGCACTAATTGGAGACAGGGTTACCAAGTACATGCAATCTCATTTCTTTGACAAGAAGCTTGAAGAGTCTCATATAAGGAGAAAAGGCAAGGAAACGCTGAAGAGAGCTTACCTTGGTGTGCGAGCAAAGATCAGAGAGGAACACAAATTAGAGGAGACAAGCAGAATGGGTTCAGCATCTGTTATGGTGATCAATGGAGAAAAACTTGTAATAGCCAATTTGGGAGATTATAGAACTGTTGTGTGCAGAGATGGCATAGCATATCAGACAACTGGCTCATACCAACAATCAACTCAAAGACATTGGTCTCGGAGACTCTTTGCAGCATGCCAATCAAGAAACGCAGCTGGTGTAAAGCATTCTAGAGGCTCAGAACTTGTCGTCAGAAGTGAAAGGATAGATTCTGATACTGAATTTTTGATATTAGCAAGCAACGGTATATGGGAGGTGATGAAAAACCAAGAGGCTGTGAATTTGATCTGTCACATAGAGGATCCGCAAGAAGCAGCTGAATGCTTGGCAAAGGAAGCTTTCATTAGGATGAGCAAAAGCAGCATTTCATGCTTAATCATTCGCTTTGACTAA 834 0.4209 MGFYLRLKLKAFRLKRFLLGHDGRRRKHMQAKKPSWMMPITHGYHVVEHNLTRDGSDDTDFDSVVAQREQMDHTELWYFEISDALIGDRVTKYMQSHFFDKKLEESHIRRKGKETLKRAYLGVRAKIREEHKLEETSRMGSASVMVINGEKLVIANLGDYRTVVCRDGIAYQTTGSYQQSTQRHWSRRLFAACQSRNAAGVKHSRGSELVVRSERIDSDTEFLILASNGIWEVMKNQEAVNLICHIEDPQEAAECLAKEAFIRMSKSSISCLIIRFD* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1699 277 Gene3D - 48 277 IPR036457 -
Apr8g1699 277 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 5 276 - -
Apr8g1699 277 Pfam Protein phosphatase 2C 74 181 IPR001932 -
Apr8g1699 277 Pfam Protein phosphatase 2C 213 267 IPR001932 -
Apr8g1699 277 SUPERFAMILY PP2C-like 63 277 IPR036457 -
Apr8g1699 277 ProSiteProfiles PPM-type phosphatase domain profile. 58 276 IPR001932 -
Apr8g1699 277 CDD PP2Cc 62 276 IPR001932 -
Apr8g1699 277 PANTHER ALPHABET, ISOFORM E-RELATED 5 276 - -
Apr8g1699 277 SMART PP2C_4 39 274 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1699 Apr-Chr8 27305522 27307716 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1699 1 276 PP2C-type Phosphatase Gene Family AT3G23360 50.360 1.02e-87 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1699 K19704 - gmx:100785227 459.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g1699 8 27305522 27307716 Apr8g1699 8 27305522 27307716 ECH