Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1690 ATGGATAGGTGCTGGTTTAATAAGTTCAAGCCAAAGGACAAAACACAGTCTTCAAAAAACAAGGAAACTACTGGCTTTGCAAAAGAAGGGTCAAAACCCCCAACAAATGAAGAAGCACCTTCAAACGTGACTAAACAGAAGGTTGCAGCTGCAAAGCAGTACATAGAAAATCATTATAAGAAACAGATGAAGGACCTGCAGGAGAGAAAAGAACGACGTAATATGCTAGAAAAAAAGTTGGCTGATGCTGAAGTCTCTGAGGAAGAGCAGAACAACTTGCTTAAGTACTTTGAGAAAAAGGAGAGGGAATACATGCGCCTTCAGAGACATAAGATGGGGGCTGATGATTTTGAGCCCCTGACTATGATAGGAAAGGGTGCATTTGGGGAGGTTAGAGTCTGCCGGGAGAAGGCAACTGGTCATGTATATGCTATGAAGAAGCTTAAGAAATCAGAGATGCTTCGCAGAGGCCAAGTCGAACATGTAAAAGCTGAGAGGAACCTACTTGCAGAAGTTGACAGCAATTGCATTGTAAAGCTTTATTATTCCTTTCAGGATGAAGAGTATTTATATCTCATAATGGAGTATCTACCTGGTGGGGATATGATGACATTGCTCATGCGGAAGGATATACTGACAGAGGATGAGGCTAGGTTCTATGTTGGGGAGACTGTCCTAGCTATAGAGTCAATTCATAAACATAATTATATTCATAGAGATATCAAGCCTGACAACTTGCTGCTAGATAGAAATGGTCACATGAAATTATCAGACTTTGGATTATGTAAACCACTAGACTGCAGTAATCTTCAGGAAAAGGACTTCTCTATTGGAAGCAACAGAAGTGGAGGCCTTCAGAGTGATGGACGCCCTGTGGCTCCTAAAAGAAGCCAACAGGAGCAGCTGCAGCATTGGCAGAAAAATAGGCGAATGCTTGCCTATTCTACAGTTGGAACACCTGACTATATTGCCCCTGAAGTTCTTCTCAAGAAAGGATATGGCATGGAATGTGATTGGTGGTCTCTGGGAGCGATAATGTATGAGATGCTAGTTGGGTATCCACCCTTTTATTCAGATGAACCAATGTTGACTTGCAGAAAGATAGTAAATTGGAGAACTCATTTAAAATTTCCAGAAGAAGCTAAACTATCTGCAGAGGCAAAGGATCTTATTTGTAGACTCCTATGTAATGTGGACCAGAGGCTTGGAACCAAAGGGGCTGATGAAATAAAGGCCCACCGATGGTTCAAAGGTATTGAATGGGAAAAATTGTACCAAATGAAAGCTGCTTTTATTCCTGAGGTCAATGATGAATTAGATACTCAAAATTTTGAGAAGTTTGAAGAGGTGGACAACCAAACTCAACCTTCCTCAAAATCAGGTCCATGGAGAAAGATGCTGTCATCTAAAGATGTTAACTTTGTTGGTTACACATATAAGAACTTCGAAATTGTGAATGATGAGCAACTACCTGGAATTGCTGAATTGAAGAAGAAGAGCACAAGAACTAAGCGACCATCTATTAAGAGCCTATTTGATGATGAATCGGCTACGGCTGCCAATCAACCTGTCCATGGGAGCTTCTTAAAACTCTTACCTACCCAACCTGAAGTTCCTGAGAAAAGTGAATCACAATGA 1638 0.4103 MDRCWFNKFKPKDKTQSSKNKETTGFAKEGSKPPTNEEAPSNVTKQKVAAAKQYIENHYKKQMKDLQERKERRNMLEKKLADAEVSEEEQNNLLKYFEKKEREYMRLQRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYYSFQDEEYLYLIMEYLPGGDMMTLLMRKDILTEDEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNRSGGLQSDGRPVAPKRSQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPMLTCRKIVNWRTHLKFPEEAKLSAEAKDLICRLLCNVDQRLGTKGADEIKAHRWFKGIEWEKLYQMKAAFIPEVNDELDTQNFEKFEEVDNQTQPSSKSGPWRKMLSSKDVNFVGYTYKNFEIVNDEQLPGIAELKKKSTRTKRPSIKSLFDDESATAANQPVHGSFLKLLPTQPEVPEKSESQ* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1690 545 ProSitePatterns Protein kinases ATP-binding region signature. 123 146 IPR017441 GO:0005524
Apr8g1690 545 SMART serkin_6 117 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g1690 545 MobiDBLite consensus disorder prediction 1 47 - -
Apr8g1690 545 CDD STKc_NDR_like 115 480 - -
Apr8g1690 545 MobiDBLite consensus disorder prediction 278 298 - -
Apr8g1690 545 ProSiteProfiles AGC-kinase C-terminal domain profile. 417 489 IPR000961 GO:0004674|GO:0005524|GO:0006468
Apr8g1690 545 PANTHER SERINE/THREONINE-PROTEIN KINASE 40 519 - -
Apr8g1690 545 ProSiteProfiles Protein kinase domain profile. 117 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g1690 545 Coils Coil 59 93 - -
Apr8g1690 545 SMART pkinase_C_6 417 481 IPR000961 GO:0004674|GO:0005524|GO:0006468
Apr8g1690 545 Gene3D Transferase(Phosphotransferase) domain 1 312 434 - -
Apr8g1690 545 Gene3D Transferase(Phosphotransferase) domain 1 201 267 - -
Apr8g1690 545 Gene3D Phosphorylase Kinase; domain 1 435 445 - -
Apr8g1690 545 Gene3D Phosphorylase Kinase; domain 1 115 200 - -
Apr8g1690 545 ProSitePatterns Serine/Threonine protein kinases active-site signature. 236 248 IPR008271 GO:0004672|GO:0006468
Apr8g1690 545 SUPERFAMILY Protein kinase-like (PK-like) 92 469 IPR011009 -
Apr8g1690 545 MobiDBLite consensus disorder prediction 1 19 - -
Apr8g1690 545 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 40 519 - -
Apr8g1690 545 Pfam Protein kinase domain 119 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g1690 545 MobiDBLite consensus disorder prediction 498 545 - -
Apr8g1690 545 Pfam Protein kinase C terminal domain 435 479 IPR017892 GO:0004674|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1690 Apr-Chr8 27206532 27214730 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1690 3 543 AGC Kinase Gene Family AT3G23310 82.353 0.0 909
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Apr8g1690 Pkinase 2.1e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1690 K08790 - gmx:100805439 1058.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g1690 8 27206532 27214730 Apr8g1690 8 27206532 27214730 ECH