Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1679 ATGAAGACAACTGTGGGAAAAGCAAAAGCTGCAGCTAGAATCAAATTTATTCGAACTGAACTACCTCCTACTTGTCAACTTGAGAAGGTAACAGGAGAAGAAAACAAAGACGATGATCACCCTCAGCTTGAAACTGCCAACAAAACTTCCAGAGATAGAGTTCAGGATCCTAGTGGTTTTTTAATGATTTTGTCCTTTCATTATTATCTGAAAGATCTTTACAATTCTTCAAAACCAGATTCAAGTCAACAAATATTGCCCAAGAAGATTTTAGGGAGAAGTGTTGAGTTATGGAAAGAAAAGGCTGATATGTCTGAGCCATTAAGTTGCCTGATGGAAGCTGCAAGCAAAAGCAAGTCTCGTAATAAATACACCATGCAAGAAAATGGTGCCATACCAGTGTTGGTGGACGCTAATGACAATGACTCTCAAGTGCCTAAGGTCAAAGTCAACAAACATTGTCATATGAAAAAGGCCGCTGGTGAACAAAATGAGTCGACTCCTTCAGAATCAAATCAAGTCAAACTTCAAAAGCTGCAAAATACCCAAGAAAAAAGACCCAAATTCTCTCAGGACTTGAATTTTCCAGCACAACCTGTGATTGGTTCAAACACTAAAAGCAACATAGGATTTGGTCCAGTCTGGGAAGCATGGGCAAGATTGCCACAAATAACTTCCTGCTACATAAGGGTCATGGATGGTAGTTTACCTGTTTCTTTTATTAAGAGGTACATCGTGAAGAAGCTTGGTCTTGCTAGCGAAGCTGAGGTGGAGATTTCATTACGAGGTGAGCCAGTCTTATCCTCATTGCAACTGAAAAACTTAGTAGACTTGTGGTTGCAAACAGTGCCAGGCAATGAGATTCAGACATCTGTTGGAAGCTCAGCCAAGGATTTTGTTATGGTTCTTTCATATGGTCGAAAGGCTTGA 930 0.4011 MKTTVGKAKAAARIKFIRTELPPTCQLEKVTGEENKDDDHPQLETANKTSRDRVQDPSGFLMILSFHYYLKDLYNSSKPDSSQQILPKKILGRSVELWKEKADMSEPLSCLMEAASKSKSRNKYTMQENGAIPVLVDANDNDSQVPKVKVNKHCHMKKAAGEQNESTPSESNQVKLQKLQNTQEKRPKFSQDLNFPAQPVIGSNTKSNIGFGPVWEAWARLPQITSCYIRVMDGSLPVSFIKRYIVKKLGLASEAEVEISLRGEPVLSSLQLKNLVDLWLQTVPGNEIQTSVGSSAKDFVMVLSYGRKA* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1679 309 PANTHER E3 UBIQUITIN PROTEIN LIGASE DRIPH-RELATED 7 308 - -
Apr8g1679 309 MobiDBLite consensus disorder prediction 30 51 - -
Apr8g1679 309 PANTHER E3 UBIQUITIN PROTEIN LIGASE DRIP1 7 308 IPR044807 GO:0004842
Apr8g1679 309 MobiDBLite consensus disorder prediction 26 54 - -
Apr8g1679 309 MobiDBLite consensus disorder prediction 162 188 - -
Apr8g1679 309 MobiDBLite consensus disorder prediction 157 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1679 Apr-Chr8 27049238 27051391 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1679 221 308 C3H Transcription Factor Family AT3G23060 57.303 1.18e-23 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1679 K16277 - gmx:102669950 244.973