Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1657 ATGGAAGAAAGAGGGAATTTTAGTATTGGGCATGCGGTGGTGGGTGATGAAGCCCCAGAGAGCTTCCACGTGGCCCCCAGAATTGAGAACAACTTGGACTTTACCCGGACCACGGTGCCAGCGCCGTCGCCGGCGACGGAGGTGAAGAAGAAGAGAGGGAGGCCTAGAAAGTATGGACCGGACGGCAAGGTAGTTTTGGGGGCGGTGACGGCGCTTTCACCGATGCCGATTTCTTCGTCGATCCCGTTGACCGAGTTTTCTGCTTGGAAGCGGGGTAGAGGGAGACCTATTGAATCTATCAAGAAGTCGTCATATAAGTTTGAAGTTGACAGTACAGGAACAGGTGAGGGAATTGCATACTCAGTTGGTGCCAATTTCACACCACATGTGCTCACTGTAAATGCTGGCGAGGACGTTACCATGAAGATTATGTCCTTCTCTCAACAAGGATCACGTGCTATATGCATTCTCTCTGCAACTGGCACGATTTCAAATGTTACACTTCGTCAACCAACTTCTTGTGGGGGTACTTTAACATATGAGGGACGGTTTGAGATTCTTTCGTTGTCTGGTTCCTTTATGCCAACAGAGAATGGAGTTACAAGAAGCAGATCTGGTGGGATGAGTGTCTCTTTGGCTGGTCCAGATGGTCGAGTAATGGGGGGTGGACTTGCTGGTTTGTTGGTAGCTGCTGGTCCTGTGCAGGTTGTGGTGGGCAGTTTTCTTCCTGGTCATCAGTTGGAGCATAAACCCAAGAAGCAGAGAGTGGAGCATATATCAACTATTACTACTACGCCTATTAATCTCCTCACTAGTGAGGAAATAAAAGTCAGTTTTGGTGGTGTAAAGCCTATCATGACACCTGCTGCTTTTCAAGAAGAGAATATTGCTTCTTTTAACAATGTTCAAGATTCTAGGAACTCATCTGCTGATGATAAAGATCCTTTACCTGAAAAGGAGTCTAACCTGAGCCAATCAAATGCTGAGGCTGCATGCTAA 999 0.4735 MEERGNFSIGHAVVGDEAPESFHVAPRIENNLDFTRTTVPAPSPATEVKKKRGRPRKYGPDGKVVLGAVTALSPMPISSSIPLTEFSAWKRGRGRPIESIKKSSYKFEVDSTGTGEGIAYSVGANFTPHVLTVNAGEDVTMKIMSFSQQGSRAICILSATGTISNVTLRQPTSCGGTLTYEGRFEILSLSGSFMPTENGVTRSRSGGMSVSLAGPDGRVMGGGLAGLLVAAGPVQVVVGSFLPGHQLEHKPKKQRVEHISTITTTPINLLTSEEIKVSFGGVKPIMTPAAFQEENIASFNNVQDSRNSSADDKDPLPEKESNLSQSNAEAAC* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1657 332 MobiDBLite consensus disorder prediction 37 60 - -
Apr8g1657 332 MobiDBLite consensus disorder prediction 301 332 - -
Apr8g1657 332 Pfam Plants and Prokaryotes Conserved (PCC) domain 128 241 IPR005175 -
Apr8g1657 332 CDD DUF296 127 241 IPR005175 -
Apr8g1657 332 Gene3D - 128 262 - -
Apr8g1657 332 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 3 7 320 - -
Apr8g1657 332 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 7 320 IPR039605 GO:0003680
Apr8g1657 332 ProSiteProfiles PPC domain profile profile. 123 262 IPR005175 -
Apr8g1657 332 SUPERFAMILY AF0104/ALDC/Ptd012-like 125 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1657 Apr-Chr8 26754780 26761866 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1657 34 279 AT-hook Motif Nuclear Localized (AHL) Family AT4G25320 60.938 1.24e-89 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1657 - - gmx:100789179 560.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g1657 8 26754780 26761866 Apr8g1657 8 26754780 26761866 ECH
Apr6g0807 6 12564164 12570828 Apr8g1657 8 26754780 26761866 PCT