Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1651 ATGGGTTTTTCAGTACTGCTACTCTTTTCTCTGTTGTTTTTCCTCTTAAACCCAACATGGGTCTGTGGGAATGCTGAGCTAAGAGCACTCATGGACATGAAATCAAGTTTGGATCCTGAGAGCATTTATCTATCCTCTTGGACTATCAATGGTAACCCATGTGATGGATCTTTTGAAGGGGTGGCATGCAATGAGAAGGGTGAAGTGACAAACGTTTCATTGCAGGGAAAGGGTCTCTCAGGGAAGCTTTCACCAGCCATTGGTGGGCTTAAGCACTTGACAGGACTTTATTTGCATTATAACTCTTTGTATGGAGAGATACCAAAAGAAATTGCAAACTTGACTGAGCTTGTTGATTTGTACTTGAATGTGAATAATCTTTCCGGGGAAATCCCTCGTGAGATCGGCAGCATGGAGAACTTGCGAGTTTTGCAGCTTTGTTATAATCAGTTGACAGGAAGCATACCTACACAGCTTGGTGCTTTGAAAAATCTGAGTGTTGTTGCTCTGCAATCAAACCAGTTAACTGGTGCTATCCCTGCTAGTCTAGGTGATTTGGCTATGCTGGTGAGGCTAGATTTGAGCTCTAATTATCTCTTTGGTTCCATACCCACTAGCCTAGCTGATGCTCCTTTATTGAAAGTTTTGGATGTTCACAACAATACCCTTTCAGGGAATGTACCTCCCGCTCTTAAGAGGTTAGATGGTGGATTTTTGTATGAATACAACTTGGGGTTATGTGGACTTGGGTTTTCATCCCTGAAAGCTTGCAATGCTTCAGATTATGTCAATGCTAGCAGACCTGAACCTTATGGAGCATCAACAAGAGATATCCCAGAAACTGCGAATGTGAAGTTACCTTGCAGTGGAACTCGGTGCTTTAATTCGTCAAAATCGGATCAGGCCACAGCAGTTACAGTTGGCATATTTGTGGTTATAATTGCAATGTTAGCAATTGGTGTTTTGACATTCACACTCTATCGTCGGCGAAAACAAAAACTTGGAGATTCTTTTCATATCTCTAATAGCCATCTAAGTTCTGATGAAGCCAAGGGTGGATATAGGAAAAATGGATCTCCTTTAGTCAGCCTTGAGTACTCTACTGGATGGGACCCTTTGGCTGATAGTAGGAATTTCACTAGTTATAGCCAAGACGTGTTCCAGAGTTTCAGGTTTAACTTGGATGAAGTGGAGTCAGCTACTCAATATTTCTCGGAGTTGAATTTGTTGGGTAAGAACAACTTCAGTGCAACATATAAAGGAGTTTTAAGAGATGGATCCGTTGTTGCTGTGAAGAGCATCAGTAAAACTAGTTGCAAGTCAGATGAAGCTGAATTTTTGAAAGGATTGAACATTTTGACCTCATTGAGGAATGATAATGTAGTGAAGTTGAGAGGGTTTTGTTGTTCAAAGGGGAGAGGTGAATGCTTTCTGATATATGATTTTGTTTCGAATGGAAACTTGTCGCACTTCCTTGATGTTAAGGAAGGAAATGGAGAAATCCTTGAATGGTCAACTAGAGTTTCTATTGTGAAAGGGATTGCTAAAGGTATGGCATATTTACATGCATACAAAGCAAACAAACCGGTTCTGGTTCACCAAAATATCTCAGCTAACAAAGTTCTCATTGATCAGCGGTATAATCCATTGCTGGCAGATTCTGGCCTGTTCAAGCTTCTTACTAATGATATTGTCTTCTCAGCACTCAAGGGTAGTGCAGCAAAGGGTTACTTAGCTCCTGAATACACCACCACTGGCCGGTTTGCCGATACAAGTGATGTTTATGCTTTTGGGGTGCTGCTTTTCCAAATCCTTTCAGGAAAGTTCAAGATCACTAGCTCAATAAGGCTTGCTGCAGAATCCTTCAAATTCCAAGAATTTATCGACCCGAATCTCCAAGGCAGATTCTTTGAATATGAGGCAGCGAAACTAGCAAAAATAGCTTTGCTTTGCACCCACGAGACTCCTTTTGAGAGACCATCCATGGCAGCCATTGTTCAAGAACTGGGCAACTGTAGTAGCTGTCTCTGA 2031 0.4156 MGFSVLLLFSLLFFLLNPTWVCGNAELRALMDMKSSLDPESIYLSSWTINGNPCDGSFEGVACNEKGEVTNVSLQGKGLSGKLSPAIGGLKHLTGLYLHYNSLYGEIPKEIANLTELVDLYLNVNNLSGEIPREIGSMENLRVLQLCYNQLTGSIPTQLGALKNLSVVALQSNQLTGAIPASLGDLAMLVRLDLSSNYLFGSIPTSLADAPLLKVLDVHNNTLSGNVPPALKRLDGGFLYEYNLGLCGLGFSSLKACNASDYVNASRPEPYGASTRDIPETANVKLPCSGTRCFNSSKSDQATAVTVGIFVVIIAMLAIGVLTFTLYRRRKQKLGDSFHISNSHLSSDEAKGGYRKNGSPLVSLEYSTGWDPLADSRNFTSYSQDVFQSFRFNLDEVESATQYFSELNLLGKNNFSATYKGVLRDGSVVAVKSISKTSCKSDEAEFLKGLNILTSLRNDNVVKLRGFCCSKGRGECFLIYDFVSNGNLSHFLDVKEGNGEILEWSTRVSIVKGIAKGMAYLHAYKANKPVLVHQNISANKVLIDQRYNPLLADSGLFKLLTNDIVFSALKGSAAKGYLAPEYTTTGRFADTSDVYAFGVLLFQILSGKFKITSSIRLAAESFKFQEFIDPNLQGRFFEYEAAKLAKIALLCTHETPFERPSMAAIVQELGNCSSCL* 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1651 676 SMART serkin_6 404 676 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g1651 676 Pfam Leucine rich repeat 140 199 IPR001611 GO:0005515
Apr8g1651 676 Pfam Protein tyrosine and serine/threonine kinase 408 669 IPR001245 GO:0004672|GO:0006468
Apr8g1651 676 PANTHER PROTEIN NSP-INTERACTING KINASE 2-LIKE 3 674 - -
Apr8g1651 676 Gene3D Transferase(Phosphotransferase) domain 1 483 675 - -
Apr8g1651 676 Gene3D Phosphorylase Kinase; domain 1 373 482 - -
Apr8g1651 676 Gene3D Ribonuclease Inhibitor 20 268 IPR032675 -
Apr8g1651 676 Pfam Leucine rich repeat N-terminal domain 24 64 IPR013210 -
Apr8g1651 676 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 3 674 - -
Apr8g1651 676 ProSiteProfiles Protein kinase domain profile. 404 676 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g1651 676 SUPERFAMILY Protein kinase-like (PK-like) 380 669 IPR011009 -
Apr8g1651 676 SUPERFAMILY L domain-like 22 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1651 Apr-Chr8 26690592 26695658 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1651 7 517 Miscellaneous Gene Families AT4G22730 56.190 0.0 575
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Apr8g1651 PK_Tyr_Ser-Thr 4e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1651 - - gmx:100816801 1182.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0815 6 12651778 12655368 Apr8g1651 8 26690592 26695658 PCT