Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1650 ATGGCTTCTCTTGCCGCTTCCACCGCGGCTGCTTCCTTGGGGATGTCGGAAATGCTTGGAAACCCCCTCAGCTTCAGTGGCGCCACCAGGTCTGCTCCATCACCCTCTACCCCTTCAACCTTCAAAACCGTTGCTCTTTTCTCCAAAAAGAAAGCAGCACCACCTTCTAAACAAAAGTCCTCTGTATCTCCTCTCAGCGACGAACTCGCCAAGTGGTATGGTCCTGATAGAAGGATCTTCTTGCCAGAGGGTCTCTTGGACAGAGAAGATATCCCGGCGTATTTGAACGGAGAAGTGCCCGGAGATTATGGTTATGACCCATTTGGTCTCAGCAAGAAGCCAGAGGACTTCGCCAAATATCAGGCATTTGAGTTGATTCACGCCAGATGGGCAATGCTTGGTGCTGCTGGATTCATCATTCCTGAAGCCTTTAACAAATTTGGAGCTAACTGTGGTCCTGAGGCTGTATGGTTCAAGACCGGAGCTTTGCTTCTTGATGGGGGTACGTTGAATTACTTCGGGAAACCCATCCCCATCAATCTTATTGTTGCTGTTATTGCTGAGATAATTCTTGTGGGTGGTGCAGAGTATTATAGAATTATCAATGGCCTGGATTTCGAAGACAAGCTTCATCCAGGTGGTCCATTTGATCCATTGGGGCTAGCAAAGGATCCAGACCAAGCTGCATTGCTTAAAGTGAAGGAAATTAAGAATGGTAGACTTGCTATGTTTGCCATGCTTGGTTTCTACTTCCAAGCTTATGTCACCGGAGAAGGTCCAGTTGAAAACCTTGCAAAACATCTCAGTGACCCTTTTGGTAACAACTTGCTCACTGTCATTGCTGGCTCTGCTGAGAGGACTCCAACTCTGTGA 873 0.4765 MASLAASTAAASLGMSEMLGNPLSFSGATRSAPSPSTPSTFKTVALFSKKKAAPPSKQKSSVSPLSDELAKWYGPDRRIFLPEGLLDREDIPAYLNGEVPGDYGYDPFGLSKKPEDFAKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGGTLNYFGKPIPINLIVAVIAEIILVGGAEYYRIINGLDFEDKLHPGGPFDPLGLAKDPDQAALLKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVIAGSAERTPTL* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1650 290 Gene3D Chlorophyll a/b binding protein domain 79 290 - -
Apr8g1650 290 SUPERFAMILY Chlorophyll a-b binding protein 71 281 - -
Apr8g1650 290 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 290 IPR001344 GO:0009765|GO:0016020
Apr8g1650 290 Pfam Chlorophyll A-B binding protein 92 253 IPR022796 -
Apr8g1650 290 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1650 Apr-Chr8 26657778 26660295 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1650 11 290 Chloroplast and Mitochondria Gene Families AT4G10340 81.851 4.11e-155 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1650 K08916 - gmx:100806585 495.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g1650 8 26657778 26660295 Apr8g1650 8 26657778 26660295 ECH
Apr6g0816 6 12664907 12667578 Apr8g1650 8 26657778 26660295 PCT