Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1636 ATGGCCACCAGGCGTTTGAGGGCATTCAAGCGGTGGATGAAGTCTAAGGGATTCGAATGGAGTGATGCACTTGAGTTTGTGGACACCCTAGAAGAGGGAATAGCTGTGAGAGCTTTGTGCGAATTGAAGGAAGGAAATGTTGTGGCTAAGATGCCTAAAGAAGCTTGCCTTACCATCCAGACTAGTGGGGCACGTGAGATCATTGAAGATACTGGTTTGGATGGTCATTTGGGCCTAGCAGTTGCCATCATGTATGAGAGAAGCTTGGGTGAGGACTCACCTTGGGCTGGCTATCTTCAGCTATTGCCTTACCAAGAATGCTTGCCTATTGTTTGGACCCTCAATGAAGTAAATGAACTTTTGTGTGGTACAGAACTTCACCAGACAGTGCAAGAAGACAAAGCTCTTATATATGAGGACTGGAAAGAGAATATTCTTCCCCTATTGGATTTAGCACCACGAAAGCTTGATGCAAAATTCTTTGGTACTGAACAATACTTTGCAGCGAAAAGTCTTATATCTTCACGGTCTTTTGAGATTGATGATTATCATGGTCATGGCATGGTTCCCCTGGCAGATTTATTCAATCATAAAACGGGTGCAGAGGATGTGCATTTCACTGCTATGCCCTCTAATTATGAATCTGATACTGATGTTGATGGTTCTAACAATGACGAGGGCATTGTTGATGAAGCAGCATTGGCTCAAAATTGCTATACGGATATGACTGCATTAGATACAGCTCATGTTGGAAACTGCATTGTTAGTGAGTCAGATAGTTCTTCAGTTACTGAGGGTGATACTTCAATGCTGGAGATGATCATGATAAAAGATGTCAGCAGTGGAGCTGAGGTATTTAATACTTACGGGTTATTGGGCAATGCTGCTTTGCTTCATAGATATGGATTTACTGAGCAAGACAATTCCTATGATATTGTGAACATTGATTTGGAACTGGTACTTCAATGGGGTTCTTCTTTGTTTTCTGACCGCCACGGTAGAGCAAGAGCCTCCCTTTGGAGAAGGTTAGGCTATTCTGCGTGTGGCAGCCAAAACAGTGAATATTTTGAGATCTCATTTGATGGAGAACCGCAGATTGAGCTCCTCATTTTATTATACATCATTTTATTACCAGATGATGCCTACCATAAGTTAGACCTTTCAGTATCAATTGCTGGAAATTGTCATGAATCAAGTGAAACCATTCTTTTGAATAATCATATCTTATCAAGGGAAACCTCTAATATGAGCAATAAATCGTTGCTGACTAAAAAAGTAAGTGATGCTCTGTTGTCACTTGCTGATATGAGGGAGAGTCTCTACGGTTTGAAATCAATTGAAGATGATATTGAGGCATTGGGAAGGTGTAGTAATGTTAGAGAAAAAAAGCAGCATCATTCTTTGATGCTGCGGATCAGTGAAAGAAAGATCCTTCAAAAGCTCAGGAATTATGCTTCACAGCCATTTAAAACCACTAACCATAGTTCTGCGAGGAAGAAGTTGAAAAGGACAACAAAGGAAAATTGTTGA 1530 0.4085 MATRRLRAFKRWMKSKGFEWSDALEFVDTLEEGIAVRALCELKEGNVVAKMPKEACLTIQTSGAREIIEDTGLDGHLGLAVAIMYERSLGEDSPWAGYLQLLPYQECLPIVWTLNEVNELLCGTELHQTVQEDKALIYEDWKENILPLLDLAPRKLDAKFFGTEQYFAAKSLISSRSFEIDDYHGHGMVPLADLFNHKTGAEDVHFTAMPSNYESDTDVDGSNNDEGIVDEAALAQNCYTDMTALDTAHVGNCIVSESDSSSVTEGDTSMLEMIMIKDVSSGAEVFNTYGLLGNAALLHRYGFTEQDNSYDIVNIDLELVLQWGSSLFSDRHGRARASLWRRLGYSACGSQNSEYFEISFDGEPQIELLILLYIILLPDDAYHKLDLSVSIAGNCHESSETILLNNHILSRETSNMSNKSLLTKKVSDALLSLADMRESLYGLKSIEDDIEALGRCSNVREKKQHHSLMLRISERKILQKLRNYASQPFKTTNHSSARKKLKRTTKENC* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1636 509 SUPERFAMILY SET domain 4 205 IPR046341 -
Apr8g1636 509 MobiDBLite consensus disorder prediction 489 509 - -
Apr8g1636 509 Gene3D set domain protein methyltransferase, domain 1 2 303 - -
Apr8g1636 509 Pfam SET domain 33 290 IPR001214 GO:0005515
Apr8g1636 509 CDD SET_LSMT 23 304 - -
Apr8g1636 509 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 6 487 - -
Apr8g1636 509 SUPERFAMILY SET domain 256 309 IPR046341 -
Apr8g1636 509 Gene3D - 306 497 IPR036464 -
Apr8g1636 509 ProSiteProfiles SET domain profile. 22 290 IPR001214 GO:0005515
Apr8g1636 509 PIRSF RMS1_SET 1 488 IPR011383 GO:0016279|GO:0018026
Apr8g1636 509 PANTHER RIBOSOMAL LYSINE N-METHYLTRANSFERASE 3 6 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1636 Apr-Chr8 26481047 26484873 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1636 1 503 NAC Transcription Factor Family AT3G56570 55.680 0.0 540
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Apr8g1636 SET 5.2e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1636 K05302 - gmx:100794971 816.609