Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1633 ATGGCTGTGCTTTATGATGCATGGCCGTGCTTACAATATGCAAGGCCGTGCTTCCATTATGTAAGGCCATGCTTTGTTGAAGCATGGCTGTGCTTGTTTCTGATGCGACTTCAGTTTGAGAATTCTTGTGAAGTTGGAGTTTTCTCAAAACTTACCAATGCTTATTGTTTTATTCCCATTGGAGGTTCTGAAAACTTCTGCAGTGCATTTGAGGCTGTGTTAGCTGATTTTGTCCCTGTGGTCAAAACCTCCATTGGTGGCACTGGTATTCTTGGTAGTCTTTGTGTTGGAAATAAGAACGGGCTTCTCTTGCCCCATACCACAACTGACCAAGAACTTCATCATTTGAGAAACAGTCTACCTGATCAAGTTGTTGTTCAGCACATAGAAGAAAGATTATCTGCTCTGGGAAATTGTATATCATGCAATGACCATGTGGCCCTCACACACACTCTGCTAATTTCATATTATAGATTGTAG 480 0.4167 MAVLYDAWPCLQYARPCFHYVRPCFVEAWLCLFLMRLQFENSCEVGVFSKLTNAYCFIPIGGSENFCSAFEAVLADFVPVVKTSIGGTGILGSLCVGNKNGLLLPHTTTDQELHHLRNSLPDQVVVQHIEERLSALGNCISCNDHVALTHTLLISYYRL* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1633 159 Pfam eIF-6 family 36 153 IPR002769 GO:0042256|GO:0043022
Apr8g1633 159 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 35 153 - -
Apr8g1633 159 Gene3D - 33 155 - -
Apr8g1633 159 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 35 153 IPR002769 GO:0042256|GO:0043022
Apr8g1633 159 SMART eIF6neu2 35 155 IPR002769 GO:0042256|GO:0043022
Apr8g1633 159 SUPERFAMILY Pentein 34 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1633 Apr-Chr8 26450444 26452601 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1633 36 153 Eukaryotic Initiation Factors Gene Family AT3G55620 81.356 2.28e-68 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1633 K03264 - gmx:100777602 208.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0845 6 12911558 12915367 Apr8g1633 8 26450444 26452601 PCT