Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1618 ATGCCTCTTAATCTAAGGAATAAGCTCAAGACCCTCTGTGCTTGTGGTGATGGCTGGTCTTATGCTATTTTCTGGCGCTTTCATCCCAAGAATTCCTTGTTGTTGACTTTGGAAGAAGCATACTATGAAGAGCAACTGGGAGAAGAGATTGTCAACATGCTTCCACAGGTCCACTTGCTGGGTGAAGGAATTGTTGGTGAAGCTGCTTTCGCTGGCAAGCACAGTTGGGTGCACTCAGACGGTCCAACTCAAGAATGGAATTTGAAGGGTCAGAATATTTGTGAGGAATTTTGTTTCTCTCTGCAGGATGATTCTGGATTGCATCAACAATTCTCCTCTGGGATAAAGACAATTGTGGTCATACCTGTCAAAGCATGGGGAGTGGTACAGTTTGGATCCAGACAGAAGATTTTGGAAAGAGTGGAATTTCTGGAGCAAACACAAAGCTTGCTCATGGAGGTAGAGGATGATATGGGTGTGCTTGACGTCTCAGAAAATGCAATTTTATCACTGGATTGCGAAAATAGTGATCTAAATGGGTTGTTGGCTCCCATTTCCTTCGAAAATTCATATCATTTGAATTCCAAACATGCTCAGGATGAAAACTCTATAGAGCTACTGAGAAAGTTTTTTACTTCCTCTAGTTCCAATGGTCTCTTTTCTTCCGAATATAAGACTTACGAAGATGGAATGATTTCGTTGCAAGGAGATTCTTCTTGTGTTGGTGACGAGCCTCAAGTTGTATTTTCAGATAAGGATAGTACTGATTTGCTTTTGAAGCCTAACTCTTCTGTGGACAGTTTAATTGCCAAAATCCCCTCTTTTGGTGCATGCAGTGGTGAAGTATCTTCTTTTGATATGTTGGAGCAACAATTGGTATCTGAAATAAGGGCACAAGAAGTTGCTGTCATGTTTTCTACAGAAGAAAATGCATTTGATAGTAGCACACTTCTAGCTCAGGATTCAGAGTTGACCTCATTGGACAGAGAGTCATTTCAAGATAAGTTACAAAATTCACTGGATAACCAACATTGTTCTCAATCTAGTATTGTGACAGATGTTAATTTCCAATCAAGCTTAAATACATTGCATGGATTCTCTGAGAACTTAGAGCCAATTGATATGTCAGAAGAAATTTTGAAGTTCAGCTCCATGGATGACCTTTGCCATTGGTTTTCTCTTTCTCAACAGGATAGTATTTGCAAAACAGGAATTGCACTGGATAACACCCTTTCTGAATCAATAGAATTTAATCCCACTTCCTTTGATCTGGTTGAAATTAATTCCTTAAATGATACATCAGTGACATGCCTAGCTGGGCATAATTCCAACTCAGATGGGAAAGAAACATCTGTAGCTGTGCATGGCTATGAAAATGGTCTCTTGGATGACATTGAACTTGATTTTAGCTACGATCAAGCTGATGAATGGTGGAGGAATATGCTTACACCAGTGGTGAGTGCTGCTATTGATAGTGGCCTTTCTGAATGCATATCAGAGTTGAATACTGATACACAGACATGCAGTCGAAAGAGATTATTCTCAGAGTTAGGAATTGAAGAGCATTTGACGGGTGGGACAAATTACAGCCCTTTTAATAGTTCTCATTTTAAGTATGAATTATCATCCAATAAAAAGCAGATGGTAGAATCTCCATTAGTAAATAGAAATCCAGCACATCTCACCAACCTTCATAGGGACGAGGCAAAAGCAGACTTGATGATGCAGCCCCTTTGTGACTTAGACAGCACAAACAATCTTCTAAGCAAGAACGATTCATTTATGAAATTTCAAGTAGGCATGTGGGTTGATGATAGCCATAGCATTAATATTGGGAGGGCTGCTCAAGTGCACCCTCAGAAGCCAGCTGAACCTACAAAGCCCACCAGGAAGAGGGCTAGGCCGGGAGAGAGTACTAGACCACGGCCTAAGGATCGCCAGCAGATCCAAGACTGTATTAAAGAGCTCAGAGGAATCATCCCCAATGGTGGAAAGTGTAGTATTGATTCTTTGTTAGACCGCACCATCAGATACATGCTTTTCTTACAAAGTGTCCTCAAGTATGCAGACAAGCTACAGGAACCAAATGAGCCAAAGGTAACTGATCAAGCTAGCAAAAACTGTGGCATTACATGGGCATTTGAAGTGGCACAACAAACAATGCTATGCCCAATTATAGTTGAGGACATGAGCTCACCTGGCCAAATGCTTATAGAGCTCCTTTGTGAGGAGCAGGGTTTCTTCCTTGAGATAGTTGACATAATTAGGGGTTTTGGGCTGAATATCTTGAAAGCAAAGATGGAAATAAGGAAGAACAAACTATGGGCACGATTTATTGTTGAGGCAGACAGACATGTGACAAGGATAGACGTATTTTTGTCCCTTATCCATCTTCTACAGCAAACAAACACCTCCAACATTGATTCTGCTAAAAAGCATTGCAATGTTATTGATGCCAATGTTTCTTAA 2469 0.4062 MPLNLRNKLKTLCACGDGWSYAIFWRFHPKNSLLLTLEEAYYEEQLGEEIVNMLPQVHLLGEGIVGEAAFAGKHSWVHSDGPTQEWNLKGQNICEEFCFSLQDDSGLHQQFSSGIKTIVVIPVKAWGVVQFGSRQKILERVEFLEQTQSLLMEVEDDMGVLDVSENAILSLDCENSDLNGLLAPISFENSYHLNSKHAQDENSIELLRKFFTSSSSNGLFSSEYKTYEDGMISLQGDSSCVGDEPQVVFSDKDSTDLLLKPNSSVDSLIAKIPSFGACSGEVSSFDMLEQQLVSEIRAQEVAVMFSTEENAFDSSTLLAQDSELTSLDRESFQDKLQNSLDNQHCSQSSIVTDVNFQSSLNTLHGFSENLEPIDMSEEILKFSSMDDLCHWFSLSQQDSICKTGIALDNTLSESIEFNPTSFDLVEINSLNDTSVTCLAGHNSNSDGKETSVAVHGYENGLLDDIELDFSYDQADEWWRNMLTPVVSAAIDSGLSECISELNTDTQTCSRKRLFSELGIEEHLTGGTNYSPFNSSHFKYELSSNKKQMVESPLVNRNPAHLTNLHRDEAKADLMMQPLCDLDSTNNLLSKNDSFMKFQVGMWVDDSHSINIGRAAQVHPQKPAEPTKPTRKRARPGESTRPRPKDRQQIQDCIKELRGIIPNGGKCSIDSLLDRTIRYMLFLQSVLKYADKLQEPNEPKVTDQASKNCGITWAFEVAQQTMLCPIIVEDMSSPGQMLIELLCEEQGFFLEIVDIIRGFGLNILKAKMEIRKNKLWARFIVEADRHVTRIDVFLSLIHLLQQTNTSNIDSAKKHCNVIDANVS* 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1618 822 MobiDBLite consensus disorder prediction 624 648 - -
Apr8g1618 822 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK (WITH NO LYSINE)-LIKE PROTEIN-RELATED 3 821 - -
Apr8g1618 822 MobiDBLite consensus disorder prediction 614 648 - -
Apr8g1618 822 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 3 821 IPR043561 GO:0003700|GO:0006355
Apr8g1618 822 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 44 IPR025610 -
Apr8g1618 822 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 50 150 IPR025610 -
Apr8g1618 822 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 633 682 IPR011598 GO:0046983
Apr8g1618 822 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 646 689 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1618 Apr-Chr8 26187369 26191841 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1618 598 802 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 52.913 2.49e-66 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1618 - - gmx:100798158 1115.91