Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1613 ATGGGAAGCAGAAGCGGAAGCAGAAGCTACTCGGCTAATCCTAGCGATTACAAGCTTCTAGAAGAAGTCGGTTATGGCGCCAGCGCCACCGTGTACCGCGCAATCTATCTCCCTTACAACGAAGAGGTGGCGGTGAAGTGTCTGGATCTGGATCGCTGCAACAGCAATCTGGAGGACATAAGGAGAGAAGCGCAAACCATGAGTCTCATCGATCATCCCAACGTGGTGAGAGCGTATTGTTCCTTCGTCGTGGAGCGAAGTCTTTGGGTGGTGATGGGATTCATGGCGCAGGGTTCTTGCTTGCATCTCATGAAGGCTGCGTATTCTGATGGATTCGAAGAGGAAGCTATTGGATCTATCTTGAAGGAGACTCTCAAGGCCTTGGAGTATCTGCACCGACACGGTCACATTCACCGTGACGTTAAGGCCGGCAATATTTTGCTCGATTCTAATGGCCAAGTCAAACTCGCTGACTTCGGCGTTTCCGCTTGCATGTTTGACACCGGCGATCGACAGCGTTCTAGAAACACCTTCGTCGGAACTCCTTGCTGGATGGCACCGGAGGTACTGCAACCTGGAACTGGTTATAATTTCAAGGCTGATATTTGGTCTTTTGGAATTACGGCGCTGGAGTTGGCTCATGGTCATGCTCCTTTCTCTAAATATCCTCCAATGAAGGTTCTTCTGATGACCATTCAGAATGCTCCTCCAGGACTTGATTATGATCGTGACAGAAAGTTCTCCAAGTCTTTTAAGGAAATGGTTGCTATGTGCCTGGTAAAAGATCAAACAAAGAGGCCAACTGTGGAGAAGTTGCTGAAACACTCGTTCTTCAAACAAGCTAAGCCTCCAGAGCTTTCTGTAAAGAAACTATTTGCTGATTTACCACCACTGTGGAATCGTGTAAAATCCCTCCAGCTTAAGGATGCAGCTCAGCTAGCACTAAAGAAAATGCCTTCTGCAGAACAAGAAGCGATATCTCAAAGTGAATATCAGCGAGGAGTTAGTGCATGGAACTTTGATATTGATGATTTGAAAGCTCAAGCTTCATTGATGCAAGATGATGATGATATTGCAGAGATGAGAGAAGAGGATGAAAACAAATTCTCAAGCTCTTGCATGGATAGAACTGATTCCCAATTGATTGTGGGCAAAAAGAATTCAGATAAATTGCAACAAGATGAGTTCACATTACAAGTAGGTAGGTTTTCTAATGACATATCACAGAGTGAGAAGAGAAATGGATCAATTGCTGAGGCAACATCATCTACCTCCGAGAAGGATGTAGGAACAAGCAAGGTTAAAATTCAATCAGTTAAACTTGGTAAAACCCAAAGTGGGCCCCTGGTGCCAGGCTCAGTGCTTGGTCATTCTTTGCCTGAAAGAGGGCGTGCATTTGAAAGGTTTGAGAATGAAAATCAGTTATCAGGTGAGAAAAATAATCGTGATATACGACGAGCTCCAAGCTTTAGTGGTCCATTGATGCTTCCCAACCGAGCTTCAGCAAATAGTTTATCGGCACCAATAAAATCTTCTGGAGGATTCAGAGATTCCTTGGATGATAAGTCCAAGGCTAATCTAGTGCAAATTAAAGGACGATTCTCCGTGACGTCAGAAAATTTAGATCTGGTGAAGGATATTCCTGTAAGTTCAGTTTCACGGCGATCTTCTCAGGGATCACCACTGAGGAAGTCTGCCAGTGTTGGTGATTGGATGGTGGATTTCAAACAATTGTCCTCCAGTGATTCTGCGAATATCAATATTCCTGCTTCACTTCTAGTGCCTCATCTTCACAATCTTTTCCAGCAGACATCTATTCAACAGGATCTTATAATGAATCTGTTGAATAGCTTGCAAACAGCTGAGGCAAATGATGCTTCTCAGAATGGAAAATTGCCGCCATTACCTCGCAGTTCAGAGAACAATGGAAGTGTTGATACAGCTGCTTCGGAGAGGGAATATCTTCTGCTGGCCAAAATTTCAGAACTTCAGTCACGGATGATCAATTTGACCGATGAATTGACTTTTGAGAAGTTAAAATACGTGCAATTGCAACAACAGCTAGCTGCCCTCTACAGCCAGGAACAAAATGGGGAAAGAGAGGAATTTGCATAA 2115 0.4421 MGSRSGSRSYSANPSDYKLLEEVGYGASATVYRAIYLPYNEEVAVKCLDLDRCNSNLEDIRREAQTMSLIDHPNVVRAYCSFVVERSLWVVMGFMAQGSCLHLMKAAYSDGFEEEAIGSILKETLKALEYLHRHGHIHRDVKAGNILLDSNGQVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQPGTGYNFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDRKFSKSFKEMVAMCLVKDQTKRPTVEKLLKHSFFKQAKPPELSVKKLFADLPPLWNRVKSLQLKDAAQLALKKMPSAEQEAISQSEYQRGVSAWNFDIDDLKAQASLMQDDDDIAEMREEDENKFSSSCMDRTDSQLIVGKKNSDKLQQDEFTLQVGRFSNDISQSEKRNGSIAEATSSTSEKDVGTSKVKIQSVKLGKTQSGPLVPGSVLGHSLPERGRAFERFENENQLSGEKNNRDIRRAPSFSGPLMLPNRASANSLSAPIKSSGGFRDSLDDKSKANLVQIKGRFSVTSENLDLVKDIPVSSVSRRSSQGSPLRKSASVGDWMVDFKQLSSSDSANINIPASLLVPHLHNLFQQTSIQQDLIMNLLNSLQTAEANDASQNGKLPPLPRSSENNGSVDTAASEREYLLLAKISELQSRMINLTDELTFEKLKYVQLQQQLAALYSQEQNGEREEFA* 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1613 704 MobiDBLite consensus disorder prediction 407 431 - -
Apr8g1613 704 Coils Coil 681 701 - -
Apr8g1613 704 Gene3D Transferase(Phosphotransferase) domain 1 98 329 - -
Apr8g1613 704 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 5 697 - -
Apr8g1613 704 SMART serkin_6 17 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g1613 704 CDD STKc_OSR1_SPAK 15 278 - -
Apr8g1613 704 MobiDBLite consensus disorder prediction 625 646 - -
Apr8g1613 704 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 5 697 - -
Apr8g1613 704 SUPERFAMILY Protein kinase-like (PK-like) 15 333 IPR011009 -
Apr8g1613 704 ProSitePatterns Protein kinases ATP-binding region signature. 23 46 IPR017441 GO:0005524
Apr8g1613 704 ProSiteProfiles Protein kinase domain profile. 17 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g1613 704 Gene3D Phosphorylase Kinase; domain 1 6 93 - -
Apr8g1613 704 Pfam Protein kinase domain 17 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1613 Apr-Chr8 26150619 26159837 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1613 10 696 MAP Kinase Kinase Kinase Kinase AT4G10730 66.906 0.0 916
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Apr8g1613 Pkinase 4.1e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1613 - - gmx:100811264 1246.49